Diospyros lotus (date-plum): 127800026
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Entry
127800026 CDS
T10632
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
127800026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dlt04131
]
127800026
03029 Mitochondrial biogenesis [BR:
dlt03029
]
127800026
Membrane trafficking [BR:
dlt04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
127800026
Mitochondrial biogenesis [BR:
dlt03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127800026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
127800026
NCBI-ProteinID:
XP_052190358
LinkDB
All DBs
Position
4:complement(42186546..42245058)
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AA seq
382 aa
AA seq
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MDRGSDAQKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVPQIKPFFSSA
LPPGTDTVWFEYKGLPLKWYIPTGVLFDLLCPEPERPWNLTVHFRGYPGNILTPCEGEDS
VKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGGSQQFKVVGDNAISGNLET
YIRVSSKLKLGVGGDEFSVKLNSPSSKTQRSIVETDTSGSVKTGRIPVRLYVCNVHDDFE
DLEDAPHVDSWDKIAYINRPIEIHREGKYFSLLDAVKTLLPEFFAEKNSISEEMPQAEVE
DEQKSSSGDGSGLGTVEEVRETLREHVELCSLPDNAEIKLLRIQGIQPKLETPFAWLANN
LMNPERFLHICAYVRVPEPITI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatagggggagcgacgcgcagaagtacgtgtgggaaggagcgattccactgcagatc
catctgcacgaatccgaagtcaccactctccctcctccaccgcccgctctgatcttagct
cctcggataggatatcttcctttgttagtaccacaaattaaacctttcttcagcagtgca
cttcctccaggcacagatacagtatggtttgaatacaaagggttgcccctgaagtggtac
ataccaacaggagttctctttgatcttctttgtccagaacctgaaagaccttggaattta
acagtgcattttagaggctatccaggaaatattttgaccccttgtgagggtgaagacagt
gtaaaatggagctttattaattcattgaaagaggcagcatatataattaatgggaattgc
aagaatgtcatgaacatgtcccaatctgatcaggtggagctttggcgctctgttatgaat
ggaggctctcagcaattcaaagtggtaggagacaatgcaataagtggtaacttggaaaca
tatatccgggtttcatctaagcttaaacttggagttggtggagatgagttttcagtgaag
ctgaactcaccctcttccaaaactcaaagaagcattgttgagacagatacttctgggtca
gttaaaaccggtcgaattccagttcggttgtatgtctgcaacgtgcatgatgattttgag
gacttggaagatgcccctcatgttgatagttgggacaaaattgcttacataaatcgcccc
attgaaattcacagggaaggcaaatatttctccttacttgatgccgtaaaaactcttcta
ccagagttttttgcagaaaaaaactccatcagtgaggaaatgccccaagcggaagttgaa
gatgagcagaaatcatcttcaggagatgggagtggtttgggaactgttgaagaagttaga
gaaacattgcgtgaacatgtggagctctgcagtctaccagataatgccgaaatcaagctt
ctccgcatccaagggattcaacccaaactggagaccccttttgcttggctggcgaacaac
ttgatgaaccccgaacgctttcttcacatttgtgcttatgtcagggttcccgaaccaatc
accatttga
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