KEGG   Diospyros lotus (date-plum): 127800592
Entry
127800592         CDS       T10632                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127800592
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dlt03021]
    127800592
Enzymes [BR:dlt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127800592
Transcription machinery [BR:dlt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127800592
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 127800592
NCBI-ProteinID: XP_052191261
LinkDB
Position
1:37859447..37872937
AA seq 1219 aa
MENHEESANEEKKLNGVADMDIDDLFEEPETSSLGVKLSNGDIHVGFDDDDFRDLVALQD
IGEATLKNLCRKASMSFFEQYGLISHQINSYNDFIKSGIQNVFDSIGEIIVDSGYDPSKK
RDNEWRHASVKFGKVTLEQPRFWTGDKFAADSGKEFLNLLPRHARLQNMTYSSRMKLQID
YQVYTQKLVRSDKFKTGKEQYVEKEVLGEDNREVIIGRIPVMVKSDLCWMNGVEKGDCDF
DHGGYFLIKGAEKIFIAQEQICLKRLWVSNNPAWTVAYREVTKRKRVYIKLVEASRSEQV
RGGVKILTVYFSVTEIPIWILFFALGVSSDKEVVNLIDCDTKDSAIVNVLTASIHDADST
CEGFRRGGKALSHVEKLIKKCRYPPEESIEDCFSKYLFPNLSGFKQKARFLAYMVKCLLQ
AYTGRRKIDNRDDFRNKRLELAGELLERELRVHVKHAERRMVKAMQRDLYGDRNLHPIEH
YLDASIITNGLSRAFSTGAWTHPYKRMERISGIVATLRRTNPLQTIADMRKTRQQVLYTG
KVGDARYPHPSHWGKICFLSTPDGENCGLVKNLAVTGLVSAKIEQPSLDNLLECGMEKLV
DDTSTLLSGKHKVFLDGDWVGVCENSVSFVVELRNKRRQKELAPQVEIKRDEQQREVRIF
SDPGRILRPLLVVENLRKIKYLKGGDFSFQSLLDNGVIELIGTEEEEDCRTAWGIQYLLR
EKEGNAPVGYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSSTNPNI
RVDTNCHQLYYPQRPLFRTMLSDSLGKPGYPLGHNGILPKPEYFNGQCAIVAVNVHLGYN
QEDSLVMNRASLERGMFRSEHIRSYKAEVDNKDATGKKPKSEDSVNFGKIQSRIGRVDSL
DDDGFPWIGANLQNGDIIIGRCAESGADHSIKLKHTERGMVQKVILSANDDGKNFGVVSL
RQVRMPCLGDKFSSMHGQKGVLGYLEAQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLE
AALGKGIACGGSQRYATPFSTLSVDAITDQLHRAGFSRWGNERVYNGRTGEMIHSLIFMG
PTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLH
ERLFTLSDSSQMHICRKCKNIANVIQRAVPGGKKIRGPYCRFCESAEEIVRVNVPYGAKL
LCQELFSMGISLKFETELG
NT seq 3660 nt   +upstreamnt  +downstreamnt
atggaaaaccatgaagaaagtgctaacgaggagaagaaattgaatggggtggcagatatg
gacatagatgatctttttgaagaaccagaaacaagcagtttgggtgtgaagttatcaaat
ggggacatccatgttggttttgatgatgatgatttcagggacttggtggcattacaagac
attggagaagctactctgaaaaatttatgtaggaaggcttcaatgtcattttttgaacaa
tatggactaattagtcaccagattaactcttacaatgatttcatcaaaagtggaatacag
aatgtatttgattccatcggtgagataattgtggactctggatatgatccatcaaagaag
cgggataatgaatggaggcatgcttcagtgaagtttgggaaggtcactcttgagcagcca
aggttttggacgggggataagtttgcagctgatagtggcaaagagttcctgaatttgttg
cccagacatgctcgccttcagaatatgacatattcatctcggatgaaacttcagattgat
tatcaggtatatactcagaagcttgttagaagtgacaaatttaaaacaggcaaagagcag
tatgttgagaaggaggttctaggggaagataatagggaagttattattggccgcattcca
gtaatggttaagtctgacttgtgctggatgaatggggttgagaaaggtgattgtgacttt
gaccatggaggctatttcttaatcaagggcgctgagaagatattcattgcacaggagcaa
atttgcttaaaaagactttgggtgtctaataatccagcttggacggtagcatatcgtgaa
gttactaaaagaaaaagagtgtatataaagctagtagaagcttctagaagtgaacaggtt
agaggaggggtcaaaatccttactgtgtatttctctgtaacagagattccaatctggatt
ttattttttgcccttggtgtatcatctgataaggaagtggttaatttgattgactgtgat
acgaaagattctgccattgttaatgtacttactgcatcaattcatgatgctgacagtaca
tgtgagggtttccgtagaggtggcaaagctcttagtcatgttgagaagcttataaagaaa
tgcagatatccacctgaagaatcaatcgaagattgttttagcaaatatttgttcccaaat
cttagtggcttcaaacaaaaggctcgctttcttgcctacatggtcaaatgtctcttgcag
gcctatactgggcgtagaaaaatagataacagggatgatttcagaaacaagaggttggaa
cttgctggtgagctgcttgagcgagagctgagagttcatgtcaaacatgctgagaggcgt
atggtgaaggctatgcagagagatctttatggagatcgcaacctgcatccaattgagcac
tatctggatgcatcaattataactaatggtctttcaagggcattctcaactggagcatgg
acacatccttacaagaggatggagaggatctccggtatagtagcaacacttaggcggaca
aatccattgcagacaatagctgatatgaggaaaacacgccagcaggttctatacacaggg
aaagttggagatgccagatacccacacccttcccactggggaaagatttgctttctctct
accccggatggtgaaaattgtgggcttgtgaaaaatttagctgtcacaggtcttgttagc
gccaagattgagcaaccttctctcgacaacttgcttgaatgcgggatggagaaactggtt
gatgatacttcaactttgctttctggaaagcacaaagttttccttgatggggattgggtt
ggagtatgtgaaaattctgtttcatttgttgtagagctgcgaaacaagcggcgccagaag
gaattggcaccccaggttgagatcaaaagagatgagcagcaaagagaagtgcgcatattt
tcagatcctggaaggattttacgtcctctactagttgttgagaatttaagaaagataaaa
tatctgaaaggaggagatttcagcttccagtctcttctggataatggagtaattgagctt
attgggactgaagaagaagaagattgccggactgcttggggaattcaatacctcttgaga
gaaaaagagggcaatgcacctgttgggtacacgcattgtgaacttgacatgtcattttta
ttaggtttgagctgtggaattatcccttttgcaaatcatgaccatgcaaggagggtcctc
taccagtctgagaagcattctcaacaggctattggcttttcctcaaccaacccaaatatc
agagtagatactaattgtcatcagctatactacccccaaaggccactttttcggacaatg
ctatctgatagtctggggaagccaggatatccgctaggtcataatggaatactgccaaag
cccgagtacttcaatggtcaatgtgctattgtggcagttaatgttcacctgggctacaat
caggaggattctctggtaatgaatcgggcttctttggagcgtggtatgtttcgatcagaa
cacatcagaagttataaagctgaggtcgataacaaagatgctacagggaagaagcccaag
tctgaggactctgtaaattttggaaaaatacaaagcagaatcggacgggttgatagcctt
gatgatgatggttttccttggattggtgcaaacttgcagaatggtgatattatcattggg
agatgtgcagagtcgggggctgaccatagtataaaattgaagcacactgaaaggggtatg
gttcagaaagtcatactatctgcaaatgatgatggaaaaaactttggtgtggtatctttg
agacaggttcgcatgccatgtcttggggacaagttctcaagcatgcatgggcagaagggt
gttctgggctatctggaagctcaagagaattttccattcacagttcaagggattgttcca
gatattgtcataaacccgcatgcatttccttcgaggcagaccccgggtcaattgctagag
gctgctttgggtaaggggattgcttgtggtggatcccaaagatacgcaactcctttctcc
actctttctgttgatgccataacagatcagcttcatagggctggattctcaaggtgggga
aatgagcgagtttacaatggccgaactggtgagatgattcattctctcatatttatgggc
ccgaccttctaccagcgtctgacccatatggctgaagacaaagtgaaattccgcaatact
ggcccagttcatccgctcaccagacagcccgtggcagacaggaagcggtttggtgggatc
aaatttggtgaaatggaacgcgactgtctcatagcccacggtgcctcagccaatctacat
gaacgactattcacgctcagcgactcctcccagatgcatatatgccgcaaatgcaagaac
atagcaaatgtcatacaacgggccgtgcctggtgggaagaagattaggggtccatattgt
cggttctgtgaatctgctgaagagattgttagggtgaatgtgccctatggagccaagttg
ttgtgccaggagcttttcagcatgggcatatctcttaagtttgaaactgagcttggctga

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