Diospyros lotus (date-plum): 127800599
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Entry
127800599 CDS
T10632
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dlt03000
]
127800599
03036 Chromosome and associated proteins [BR:
dlt03036
]
127800599
Transcription factors [BR:
dlt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
127800599
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
127800599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
Motif
Other DBs
NCBI-GeneID:
127800599
NCBI-ProteinID:
XP_052191269
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Position
4:36787812..36794804
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AA seq
643 aa
AA seq
DB search
MTDGHLFNNISLGGRGGTNPGQLRVHSGGILWKKLGGGKAVEVDKTDIVGLTWMKVPRTN
QLGVRIKDGLYYKFTGFRDQDVATLSSFFQNACGITPEEKQLSVSGKNWGEVDLNGNMLT
FLVGSKQAFEVSLADVSQTQLQGKNDVLLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENHPPAQVFRDRIMSMADVGAGGEEAVVMFDGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVIVTLDPPIRKGQTLYPHIVLQFETDYVVESTLSMN
DDLLHTKYKDKLEPSYKGLIHEVFTLILRGLSGAKVTRPGKFRSCQDGYAVKSSLKAEDG
LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGGVQTADGVAAVLQNDDDDAVDPHLERIKNQAGDDESDE
EDEDFVLDKDDEGSPTDDSGGEESDVSESGDVKEKPAKKESKKEPSSKASSSKGKSKDGD
EDGSKKRKQKKKKKDPNAPKRAMSGFMFFSQSERENIKKSNPGISFTDVGRVLGDKWKKM
SAEEKEPYEVKARADKKRYKDEISGYNNPQPMNIDSGNESDSA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcacctattcaacaatatttctcttggtggtcgcggtggcactaatcca
ggtcaactcagggttcattcaggaggcatattgtggaaaaaactaggaggtgggaaagct
gttgaagtagataagactgatatcgttggcctcacctggatgaaggtaccccgtactaat
cagctgggggtcagaattaaagatggtttatactacaaattcactgggttccgtgaccag
gatgtggctacccttagcagtttttttcagaatgcttgtgggataacacctgaagagaaa
cagctttctgtcagtgggaaaaactggggtgaagttgatctaaatgggaatatgctgact
tttctggttggttcaaagcaagcatttgaggtgtctttagcagatgtctcccaaacacaa
cttcaagggaaaaatgatgtccttttggagtttcatgtggatgacacaactggagctaat
gagaaagattcactgatggagataagtttccacatacctaattccaacactcagtttgtt
ggtgatgaaaatcatcctcctgctcaggtcttccgtgacagaatcatgtcaatggcagat
gttggtgcaggcggtgaagaagctgttgttatgtttgatggaattgcaattctcactccc
aggggccgatacaatgttgaacttcatctttcatttttacggcttcaagggcaagcaaat
gactttaaaatccagtatagcagtgttgttcgtctctttttactgcccaagtccaaccaa
ccacataccttcgttattgttactcttgacccacccatccgtaaaggccaaactctctat
ccgcatattgtattacagtttgagacagactatgtagtggaaagcaccctatccatgaat
gatgatcttttgcataccaaatataaggacaagctggaaccatcttataagggcctgatt
catgaagttttcacattgatattgcgtggcttgtctggcgccaaagttactagaccagga
aagttccgcagctgtcaagatggctatgcagtaaagtcttcattgaaagctgaagacggt
ctcttgtatccacttgaaaaaagcttcttctttttacccaagcctccaaccctaattctt
cacgaagagattgactatgtggaatttgagaggcatgctgctggaggctcaaacatgcat
tactttgatcttcttatcagattgaagactgagcaagagcatctcttcaggaacattcag
agaaatgaatatcacaatctttttgacttcatcagtgggaaaggtttgaaaatcatgaat
ctgggaggtgtccaaactgcagatggtgttgctgctgttttgcagaatgacgacgacgat
gcggttgatccccatcttgagcggattaagaatcaagcaggtgacgatgagagtgatgag
gaggatgaagattttgttcttgacaaggatgacgaaggctcacctacggatgattctggg
ggagaggaatctgatgtgagcgagagtggagatgtgaaagagaaacctgccaaaaaggag
tccaagaaggagccttcttcgaaggcttcctctagtaagggcaagtctaaagatggtgat
gaagatggttcaaagaagaggaaacagaagaagaagaagaaggatcccaatgcaccaaag
agggccatgtctggtttcatgttcttctcacagagtgaaagggagaacatcaagaaaagt
aatcctggaatttcattcactgatgtggggagggttctcggagataaatggaaaaagatg
tcagctgaggagaaagaaccatatgaagtgaaggcccgtgcggataaaaagcgctacaag
gatgagatcagtggttacaacaaccctcagcctatgaacatagattcgggaaatgaatct
gacagtgcatag
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