Diospyros lotus (date-plum): 127800811
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Entry
127800811 CDS
T10632
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127800811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127800811
03110 Chaperones and folding catalysts [BR:
dlt03110
]
127800811
03029 Mitochondrial biogenesis [BR:
dlt03029
]
127800811
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dlt04147
]
127800811
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
127800811
Messenger RNA biogenesis [BR:
dlt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
127800811
Chaperones and folding catalysts [BR:
dlt03110
]
Heat shock proteins
HSP60 / Chaperonin
127800811
Mitochondrial biogenesis [BR:
dlt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
127800811
Exosome [BR:
dlt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127800811
Exosomal proteins of other body fluids (saliva and urine)
127800811
Exosomal proteins of breast cancer cells
127800811
Exosomal proteins of colorectal cancer cells
127800811
Exosomal proteins of bladder cancer cells
127800811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
127800811
NCBI-ProteinID:
XP_052191600
LinkDB
All DBs
Position
4:complement(1437671..1443435)
Genome browser
AA seq
571 aa
AA seq
DB search
MYRFAANLASKARVARNSTHQIGGRLSWSRNYAAKDIRFGVEARALMLRGVEELADAVKV
TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGINMAIDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIADGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLILIHEKKISSINAVVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLATLTGGDVITEELGLNLENVNIDMLGSCKKVTISKDD
TVILDGASDKKALEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDQKIGVQIIQNALKT
PVHAIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSALMTTTEAIVVELPKDEKESPAMPPMDY
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcttcgctgcaaaccttgcctccaaggcccgggtcgccagaaatagcacccat
cagattggtggtagattgagctggagcagaaactatgcggccaaagatatccgatttgga
gtggaggctcgggctttgatgctgagaggtgttgaagagctcgctgatgctgttaaagta
actatgggcccgaagggtcgcaatgtggtgattgaacaaagttatggtgccccaaaagtg
acaaaggatggtgtgacagtggcaaagagcattgagtttaaggacaaggtcaagaatatt
ggagcaagccttgtaaaacaggttgcaaatgcaacaaatgatgtagctggtgatggtacc
acatgtgctactgtccttacccgagcaatatttactgaaggctgcaaatcagttgctgct
ggaatgaatgcaatggacctaagacgaggtatcaacatggctatcgatgccgtggtaaca
aacctgaaaagcagggctcgaatgattagcacgtctgaggaaatagctcaggttggtaca
atatctgcaaatggcgaaagagaaattggtgagctgatagcaaaggctatggagaaagtt
ggcaaggaaggtgtcatcaccattgcggatggcaagacactgtataacgaattggaagtt
gttgaggggatgaaattggataggggttacatatccccatatttcatcaccaatcagaag
aaccagaaatgtgaattagaagaccctctaattctaatccatgagaagaaaatctcaagt
atcaatgctgttgtgaaagtactagaattggctttgaagagacaaaggcccctgttgatt
gttgcagaagatgtggaaagtgatgcactggcaactctcattctaaataaacttcgtgct
gggataaaggtttgtgccataaaagcccctgggtttggggagaaccggaaggctaacctg
caggatcttgccactctcactgggggagatgttataactgaagagcttggtttgaatttg
gagaatgtaaacatagatatgcttggctcatgcaagaaggtcacaatatccaaggatgac
actgtaattcttgatggtgctagtgataagaaggctttagaggaaagatgtgaacagatt
aggtcagcaattgaattgagtacttctgattatgacaaggagaagttgcaagagagatta
gctaagctttctggtggtgttgccgtattgaagattggaggggccagtgaagctgaagta
ggtgagaagaaggacagagtaactgatgctttgaatgccacaaaggcagcagtagaagaa
gggattgtgccagggggtggagttgctcttctttacgcatcgaaagagttggataagctt
tcaacagccaattttgatcagaagattggtgttcagattattcagaatgcactcaagacg
cctgtgcatgcaatagcttctaatgctggagtcgagggtgctgttgttgtcggcaaacta
ttggagcaagataaccccgatcttggatacgatgcagccaaaggtgaatacgtggacatg
gtcaagtctggcatcatcgaccccttaaaagtgataaggacagctttggttgatgcagca
agtgtgtcggcactgatgaccaccaccgaagcaattgtggtcgagctccccaaggatgag
aaggaatccccagcaatgcctcccatggattattaa
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