Diospyros lotus (date-plum): 127801030
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Entry
127801030 CDS
T10632
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03020
RNA polymerase
dlt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127801030
09124 Replication and repair
03420 Nucleotide excision repair
127801030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127801030
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127801030
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127801030
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127801030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
127801030
NCBI-ProteinID:
XP_052191765
LinkDB
All DBs
Position
5:complement(6626064..6634129)
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDDNVLFAG
YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNALETELAEHSRSY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccggaccgttacgagcgatttgttgttcccgaggggaccaagaaggtttca
tatgaacgagacacgaagatcataaatgcagcctcgttcacgatcgagcgagaggaccac
acaatcggcaacatccttcgcatgcaattgcacagggatgataatgtgctctttgctggc
tacaagcttcctcaccctcttcagtacaaaatcattgttaggattcatacaactagccag
tcttcaccgatgcaggcatataatcaagctatcaatgatctggacaaggaacttgattat
ctgaagaatgctttggagactgagctagcagagcattccaggagctactga
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