Diospyros lotus (date-plum): 127801069
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Entry
127801069 CDS
T10632
Name
(RefSeq) WD-40 repeat-containing protein MSI2 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03082
ATP-dependent chromatin remodeling
dlt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127801069
03083 Polycomb repressive complex
127801069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dlt03036
]
127801069
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127801069
Histone modification proteins
HAT complexes
HATB complex
127801069
HDAC complexes
Sin3A-HDAC complex
127801069
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127801069
PRC2.2
127801069
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127801069
Heterochromatin formation proteins
Other heterochromatin formation proteins
127801069
Chromatin remodeling factors
NuRD complex
127801069
NuRF complex
127801069
NuRF complex (fruit fly)
127801069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_SPT8
WD40_RFWD3
WD40_MABP1-WDR62_1st
MIOS_WD40
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
DUF6922
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
127801069
NCBI-ProteinID:
XP_052191854
LinkDB
All DBs
Position
5:33958731..33964330
Genome browser
AA seq
403 aa
AA seq
DB search
MGEYEEAEIEQVEEEFAVWKKNTPFLYDLVICHPLEWPSLTVHWLPSPPSPHPSDDAFAL
HKLVLGTHTSDDFPNFLMVADAHIPRNPANFATDRPLDSAIPKVEIVQKIYVDGEVNRAR
CMPQNPSVVSAKTSGSEVYVFDCGKHPMTEEGGSCDPDVRLRGHEKEGYGLSWSPFKEGY
LLSGSNDCKICFWDVSAMPQDKVLNAMHVYEAHESVVEDVSWHLKNENLFGSVGDDCLLV
IWDLRTNKPQHSFQAHEKEVNYLSFNPYNEWIVATASSDTTVGLFDIRKLTTPLHIFSSH
SEEVFQVEWDPNHETVLASSAGDRRLMVWDLNRIGDEQLEGEAEDGPPELLFSHGGHKAK
ISDFSWNKNEPWVISSVAEDNTLQVWEMAESIYHDEMQTIDCP
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatacgaagaggcggaaatcgagcaggtcgaggaggagttcgcggtgtggaag
aagaacaccccctttctctacgatctcgtcatctgtcatccgctcgagtggccttctctc
acagttcactggcttccatcccctcccagcccccacccctccgatgatgcctttgccctg
cacaagctcgttctcgggacccatacttccgatgatttccccaatttcctcatggtcgcc
gacgctcacattccccgtaatcccgccaatttcgccaccgatcgcccccttgactctgct
attcccaaggtggagatagtacagaagatatatgttgatggagaagtgaatagagcacga
tgcatgcctcagaacccatctgttgtatcagcaaagactagtgggtctgaagtctatgta
tttgactgtggcaaacacccaatgacggaggaagggggatcttgtgatcctgatgtgaga
ctgagaggtcatgaaaaagaaggctatgggttgtcatggagcccgttcaaagaggggtac
cttttgagtgggtcaaatgattgcaaaatatgtttctgggatgtctctgccatgcctcaa
gataaggtgctcaatgcaatgcatgtttatgaggctcatgaaagtgtggttgaggatgtg
tcttggcacttgaagaacgaaaatttatttggatctgtgggtgatgattgtttactagtg
atctgggacttgcgcacaaacaaaccccagcactctttccaagctcatgaaaaagaggtg
aactatctatcttttaatccatacaatgaatggatagtagcaacagcatcttcagatact
actgttggtctctttgatatccggaagctgactactccattgcacatattcagtagtcat
tcggaggaagtattccaggtagaatgggatcccaatcatgaaactgttttggcatcctct
gctggtgacagaagactgatggtttgggaccttaacaggattggtgacgagcaactggaa
ggagaagcggaagatgggccacctgagcttctcttctcacatggcggtcacaaagcaaag
atatctgatttctcatggaacaagaatgaaccgtgggtaatttctagtgttgcggaagac
aatacccttcaagtctgggaaatggctgaaagtatttatcacgatgagatgcagactatc
gattgtccatag
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