Diospyros lotus (date-plum): 127801076
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Entry
127801076 CDS
T10632
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127801076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127801076
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127801076
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
FapA
Cas_TM1802
CUX1_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
127801076
NCBI-ProteinID:
XP_052191876
LinkDB
All DBs
Position
5:12048877..12090110
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AA seq
711 aa
AA seq
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MSSGFSAPTNPSPSSSSTLFSAFSSSSSTSASASSSPFSFPLASSSSSMTSAFSLAPSSS
AAPSMGFGASTSSASPAPAFSFGTGAALVPSSVASTPLFGGSSSAAFGTSNLFGEASSSS
ASFAASSLVGSAPSSAVPKNLFGSSSFGSVPSTTTTLFGSSTSSSSSAFTGSNSAAFSFS
SNLFGSSFSTSASTASLFSSNLVGASSSGSVSAISTSAFSSPLFGSSPSSSAATATPNLF
VSSAATSTSSPFSSLSKPAFSFPSASAFSKEIATSASTSTASSTPSTGSSSTASSSFSVG
TSVSFGSQSAFGFGNTVSSTASAASIGTATSTSLPAWKPPSLGFGTTSPLFSTVTTTTSG
STLAATMSSFSAASSASSAPVPAFPTFGASSSSSAAASTAATTAVSSAPSTPSFPSFSIT
GAAVSSSSTSSLPSFSLPTKTPTPGSSVQSQTTSAAALFGVPASTVASTISSASTATPQT
STSITVASSSGTTTTTSTTVSPAPKLPSEITGKTVEEIIKEWNSELQECTGKFRKQANAI
AEWDRRILQNRDVLLKLESEVAKVVETQASLERQLELIETHQQEADKALQSMEEEAERIY
KDERNVLLDDEAASTRDAMYEQAEVIERELEQMVEQIKTIIQTLNANQGGDLDTVDGTTP
LDVVVRILNNQLSSLMWIDEKAEEFSSRIQKLASQGSAADRKLMGPKLWLT
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcttctccgcccccaccaatccatctccatcttcatcttcaactctcttt
tctgcattttcgtcttcctcttctacaagcgcttccgcctcctcttcgcccttttccttc
ccccttgcttcctcttcatcttcgatgacatccgcgttctcacttgctccctcatcctca
gccgcgccctccatgggatttggagcgtcgacttcctcggcgtctcccgccccggcgttt
tcgttcggaaccggtgccgccttggtcccctcctccgtcgcttccacgccgctgttcggc
gggtcgtcgtcggctgcttttgggacttcgaatctgttcggagaggcttcttcgagctcg
gcgtcgttcgctgcttcgagcttggtcggatctgctccttccagtgctgtcccgaaaaac
ctttttgggtcttcctctttcggttcggttccaagcactactacaaccttgtttgggtct
tctacttcttcttcaagttcagcttttactggttctaattctgctgcgttttcattttcg
tcaaatctttttggatcttccttctcaacttcagcttctactgcttctttattttcttca
aacttggttggggcttcatcatcgggctcggtgtctgctatttccacttcggccttttct
tctccgctatttgggtcttccccttcgtcctctgctgccactgctactcctaatttgttt
gtgtcttctgcggctacatctacttcttcccctttctcgtccttgtccaaacctgcattt
tcattcccaagcgcgtcagcgttttcaaaggaaattgcgacttcagcatccactagcact
gcttcttcaacgccttctactggttcatcttcaacagcgtcatccagtttctcggttggg
acttcggtgtcttttggttctcaatctgcctttgggtttggaaataccgtttcttctact
gccagtgcggcgtccataggcacagccacatctacaagcttgcccgcttggaagccaccg
tcattaggtttcggaactacttctccattgttttctacggtgacgacaaccaccagtggg
tctactctggcagctacgatgagttcattttctgctgcatctagtgcttcgtctgctcca
gtgccagcttttcccacttttggtgcgagttcttcatcatcagctgcagcgtcgacagct
gctaccacggccgtttcttcagccccctctactccttccttcccaagttttagtatcacc
ggcgcagctgtttcctcaagcagtaccagttcactaccaagtttctcgctgcctaccaaa
acaccaacccctggctcatcagttcaatcgcaaacaacctctgctgccgccctgtttggt
gtgcctgcttctactgttgcttcaacaatatccagtgccagtactgctaccccacagaca
tcaacatccataactgtagcatcgagtagtgggactactacaaccaccagcactacagta
tccccagctccaaaattgccatctgagatcactgggaaaactgttgaggagattatcaag
gagtggaactctgagctacaagaatgtactgggaaatttcggaagcaggcaaatgcaatt
gctgagtgggacaggagaattttgcagaatcgtgatgttcttcttaagcttgagagcgaa
gtcgcgaaagtggttgagactcaagctagcttggagcggcagctagagcttattgagacc
catcagcaagaggcagataaggctttgcagagtatggaagaagaagctgaacgcatttac
aaagatgagcgaaatgtgcttcttgatgatgaagcagcttccacacgagatgcaatgtat
gagcaagccgaagtcatagaaagggaacttgaacagatggttgaacagatcaagaccatt
attcagacccttaacgccaaccagggtggagacctcgatactgttgatggaacgactcct
ttggatgttgtcgtccgcatattaaacaatcaattaagttcacttatgtggattgatgaa
aaggcggaggaattctcatctcgcattcagaagcttgcaagccaggggtcagctgcagac
cgcaaattaatgggcccaaagctgtggttgacctga
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