Diospyros lotus (date-plum): 127801132
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Entry
127801132 CDS
T10632
Name
(RefSeq) LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127801132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dlt04131
]
127801132
Membrane trafficking [BR:
dlt04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
127801132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
127801132
NCBI-ProteinID:
XP_052191961
LinkDB
All DBs
Position
5:42533638..42576267
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AA seq
1733 aa
AA seq
DB search
MSGAPSSSSSSSSSSSQSGQGGGLGGESRCGRVLGPSLDKIIKNAAWRKHSHIVSACKSV
LDKLQTLSDSPDPILSCSPLYGFSNPSDAQFVLQPLLLALDSASPKLVEPALDCAFRLFS
LGLILRCEIDRPSSSSNPLPSPLIPRLLESVCNCTAAVGEDDAVELSVLRVLLSAVRSPS
VLIRGDCLVHIVRTCYNVYLGGANGTNQICAKSVLAQMMIIIFTRVQHDSPLVQFRTVSV
SELLEFSDRNLNEGSSIQFAQNFLHEVVQVTEGVVDSNSLPDMQNGLLPSATLDGKAKVD
NAELEETVDSTGDSKIREDGFMLFKNLCKLSMKFSSQEQPDDHILLRGKILSLELLNVIM
DNVDPTWRANERFLNAVKQYLCLSILKNSALSVMTIYQLLCSIFKSLLSKLRSALKAEIG
IFFPMLILRVLENVVQPSFLQKMTVLNLLEKISQDSQIIIDIFVNYDCDVDAPNIFERTV
NGLLKTALGPSPGSTTTLSPAQDITFRFESVKCLVRIIKSMGTWMDQQLRIGDFCPSKST
DNGSSAVNYTNFSGEEGTLPDYDMHSEANSEFSNAATLEQRRAYKLELQKGVSLFNRKPS
KGIDFLISTKKIGNSPEAVACFLKNTAGLNETVIGDYLGERQEFALKVMHAYVDSFNFER
MDFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPNSFTSADTAYVLAYSVIMLNT
DAHNNMVKDKMTKADFVRNNRGIDDGKDLLEEYLGALYDQVVKNEIKMNSDSSAPQSKQA
NSLNKLLGLDGILNLVWKQTDEKPLSANGLLIKNIQEQFKANSGKSESVYHSVTDAAILR
FMVEVCWGPMLAAFSVTLDQSDDRTATSECLQGFRHAVHVTAVMGMQTQRDAFVTTVAKF
TYLHCAADMKQKNVDAVKAIISVAIEDGNYLQESWEHILTCLSRFENLQLLGEGAPSEAS
FFTVSNEADEKTLKSSTAFPSLKRKGSLHNPAVMAVVRGGSYDSTSIGVNSSGLVTPEQI
NNFISNLNLLEQIGNFELNHIFAHSQRLNSEAIVAFVKALCKVSMSELQSPTDPRVFSLT
KIVEVAHYNINRIRLVWSRIWSVLSDFFVSVGLSENLSVAIFVMDSLRQLSMKFLEREEL
ANYNFQNEFLRPFVIVMQNSSSAEIRELIVRCISQMVLSRVSNVKSGWKSVFMVFTAAAA
DERKNIVLLAFETMEKIVREYFPYITETEAVTFTDCVRCLITFTNSRFNSDVSLNAIAFL
RFCAVKLADGALVSNEKSKIDDLSVPVGNNDNYSDRQIVTDKDDHSSYWVPLLAGLSKLT
SDPRSAIRKGALEVLFNILKDHGHLFSQPLWNNVFNSVVLPIFKCARDRKETQTGDDQLS
GGSIWDPETSAVAVQCLVDLFVSFFSMLRSKLHGAVSILVGFIKSPGQGAASTGVAALTR
LAVELGDRLSEDEWRNLFLSLKESAAASLPGFWKLVRTMDTTEVPDVANSYNDSEMASDH
ELSNEDSEDDNLQTVAYVVSRMKSHIAAQLLIVQVITDLFKMHQQYLTSGNIRVVVDILS
SVASHAHQLNSEMGLQQKLQRACSILEIPEPPIVHFEIESYQNYLNFLHDLIVNNGLVSE
ELNVEPELVSVCGKVVQIYLECSGLESVRRQQQQKVHWILPLASARREELAARTPLVVLA
LRIMSGFVSDSFRRYASQLFPLLVELVRSEHSSGEVQRVLSLIFQSCIGPIVL
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagccccgtcgtcgtcgtcgtcttcttcttcttcatcatcgcagagtgggcaa
ggaggagggctaggaggggaatcgaggtgtgggcgggtgctgggcccatcgctcgacaag
atcatcaagaacgccgcctggcgaaaacactcccacatcgtctccgcctgcaaatccgtg
ctcgacaagctccagaccctctccgattcccccgatccgatactttcctgctcccccttg
tacggcttctcgaacccctccgacgcccaattcgtcctccagcccctcctcctcgccctc
gattccgcctcccccaagctcgtcgagcccgccctcgactgcgccttccgattgttctcc
cttggcctcatcctccgctgcgaaattgaccgcccctcttcctcctccaaccctctcccc
tcccccctcattccccgcctcctcgagtctgtctgcaactgcaccgctgctgtcggcgag
gacgacgccgtcgagctcagcgtcctcagggtcttgctctccgccgtccgatctccctct
gtcctcatcaggggcgattgcctcgtccacattgtcaggacctgttacaatgtctatctt
ggtggcgccaatggcaccaatcagatctgtgcaaagtcggttcttgcccagatgatgatc
attattttcaccagggtccaacacgactccccgctggttcagtttcgcaccgtatctgtt
tccgagctcttggagttctcggacaggaacttgaatgaaggaagttcaattcaattcgcg
cagaacttcctgcacgaggttgtgcaagttactgaaggggttgttgattcaaattctctc
ccagacatgcaaaatggacttcttcccagtgccacgttggatggaaaagctaaagtggac
aatgcggaattagaggaaacggttgattccactggtgactctaagattcgggaggatggt
tttatgcttttcaaaaatttgtgtaaattatcaatgaagttctcatctcaggaacagcct
gatgatcacatccttctcagggggaagatattgtctctggagcttcttaacgtaatcatg
gacaacgtggatccaacttggcgtgcaaatgagaggtttcttaatgctgtcaagcagtat
ctttgtttatccattctaaagaacagtgcattgtcagttatgactatttaccagcttctc
tgttcaatattcaagagcttgttgtcaaagttaagatcagcactgaaagctgaaattgga
attttctttcctatgctcatcctgcgtgtgcttgagaatgtagttcagcctagtttctta
cagaagatgactgtcctcaatttactggaaaagatctctcaagattctcagattattatt
gatatttttgtcaattatgactgtgatgtggatgctccaaatatatttgaaaggactgtc
aatggtcttctgaaaactgctctaggaccgtctcctggttcaactaccactttgtctcca
gcccaggatattacattccggtttgaatctgtgaaatgtttggttaggatcatcaagtca
atgggaacatggatggatcagcaattgagaataggagatttttgcccatcaaagagcact
gataatggcagttcagcagtgaattatacgaactttagtggagaagaaggcactctccct
gattatgacatgcattcagaagcaaattctgaattctcaaatgctgctacccttgaacaa
cgccgggcttacaaattagagctccagaaaggtgtctcattgttcaacagaaaaccttcc
aagggaattgactttttaataagcacaaaaaagattggcaattctcctgaagcagtggct
tgtttcttgaagaacactgctggcctcaatgaaactgtgataggtgactatttgggcgaa
aggcaggagtttgctttaaaagttatgcatgcttatgtggattcttttaactttgaaaga
atggattttggtgaagcaattagattcttcctaagaggcttcaggttacctggagaggca
caaaaaattgaccgtattatggaaaaatttgctgaacgttattgtaaatgcaatccaaat
tcctttacaagtgcagacacggcttatgttcttgcttactctgtgataatgctcaacaca
gatgctcacaataacatggtaaaagataagatgacgaaggctgatttcgttcggaataat
cgcgggattgatgatggcaaggatttactggaggagtatttgggtgctctctatgatcaa
gttgtgaaaaatgaaattaagatgaattccgactcctctgcaccacagagcaagcaggca
aacagtctaaataaactattgggcttggatggtattctcaacctagtttggaagcagacg
gatgagaaaccattgagtgcaaatgggcttcttattaagaacattcaagagcaatttaaa
gcaaattcaggaaaatcagagagcgtttaccattctgtcacagatgctgcaatattgagg
tttatggtggaggtctgctggggtccaatgcttgcagcattcagtgtgacacttgatcag
agtgatgacaggactgctacttctgaatgcttacagggctttcgacatgctgtgcatgtc
actgcagtgatgggtatgcagacccagagagatgctttcgttacaactgttgccaagttt
acctaccttcactgtgctgcagacatgaagcaaaaaaatgttgatgctgtcaaggcaata
atatcagttgcaattgaagatgggaactatctccaggaatcttgggaacatatcttaaca
tgtctctctcgatttgagaatctacaactgttgggggagggagcaccatctgaagcttca
tttttcactgtatccaatgaagcagatgagaaaacactgaagtcctccactgcttttcct
tctttaaagagaaaaggatctctccacaatccagctgtgatggctgttgttcgagggggt
tcatacgacagtactagcattggagtcaattcttcagggctggtaacccctgaacagatt
aataacttcatttcaaatttgaatctgcttgagcaaattgggaattttgagctgaatcat
atatttgctcatagccaaaggttgaatagtgaggcaattgtagcttttgtgaaagccctt
tgcaaagtttccatgtcagagttgcagtctccaacagatcctcgtgtattcagcctcaca
aaaatagttgaagttgcgcactacaatataaacagaatcagattggtgtggtctcgtata
tggagtgttctttcagatttctttgtgtctgttggcttgtcagaaaatctctctgttgca
atttttgtcatggattcattgcggcaactttccatgaaattcttagagcgagaggagttg
gcaaactacaatttccaaaatgaatttttgagaccattcgtaattgtgatgcagaatagc
agctctgctgaaatcagggagctaatagttaggtgcatttcacagatggtcctcagccga
gtcagtaatgtaaaatctggctggaagagtgtttttatggtttttacagctgctgctgcc
gatgaaaggaagaacattgtcttgttggcctttgaaaccatggaaaagatagtacgggaa
tatttcccttatataacagagaccgaggctgtgacctttactgattgtgttagatgcctc
atcacctttacaaatagtaggtttaacagtgatgttagcctcaatgctattgcttttctc
cggttctgtgctgtcaaacttgcagatggggcacttgtttccaatgagaagagcaagatt
gatgatttatctgttccagtaggaaataatgataattattcagatagacaaattgtcaca
gataaagatgatcattcatcctattgggttcctttgcttgcaggtttatcaaaattaacc
tcagatccaagatcagccatcagaaagggtgctttggaggtgctttttaatattttaaag
gatcatggtcatcttttttcacaaccattgtggaacaatgttttcaattctgtagttctc
cccatatttaaatgtgcacgtgataggaaagaaacccaaacgggtgatgaccagctttct
ggtggaagtatctgggatcctgaaacctctgcagtggctgttcaatgtctagtagactta
tttgtcagtttcttcagtatgctgcggtctaaactacatggagcagtgtcaatactggtg
ggcttcataaaaagtcctggtcaaggtgcggcaagcactggggttgctgcacttacccgc
ctggcggttgagttgggagacagactttctgaagatgaatggagaaatctatttctttct
ttgaaagagtcagctgctgcttcattgccaggattttggaaacttgtgcgaaccatggat
acaactgaggtcccggatgttgctaattcttataatgattcagaaatggcttctgatcat
gaattgagcaatgaagattctgaagatgacaacttgcagacagtggcatatgttgtttca
cgaatgaagagtcatatagcagcacagcttctcattgtacaggtcattaccgatctgttc
aagatgcaccagcagtacttgacatcgggcaacatcagggtcgttgtcgatatactttcg
tcggttgcatcgcatgcccaccagctgaactcagaaatggggcttcagcagaagctgcag
agagcatgctcaatcctggagatccctgaacccccaatcgttcactttgaaatcgagtcc
taccagaattacctaaatttcctgcatgatttgattgtgaataacggattggtgtcggaa
gagttgaacgtagagccggagcttgtgtcggtatgcggcaaagtggtgcagatatacctg
gagtgttcggggttggaatcagtccgccggcagcagcagcagaaggttcactggattctg
cccttggcttcagcaagaagggaagagctggcagccaggactcctctggtggtgttggca
ttgcggatcatgagcggattcgttagtgattcgtttaggaggtatgcatcacaattattc
ccattgttggttgagcttgtgcggagtgagcacagttcgggagaagtgcagcgtgttcta
agcctcattttccaatcatgtataggccccatagttctctaa
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integrated database retrieval system
