Diospyros lotus (date-plum): 127801169
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Entry
127801169 CDS
T10632
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127801169
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127801169
mRNA degradation factors
5'-3' decay
Decapping complex
127801169
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127801169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127801169
NCBI-ProteinID:
XP_052192020
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All DBs
Position
5:complement(15288349..15326619)
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AA seq
486 aa
AA seq
DB search
MNPRGRYPPGIGGLGGRGGGGSASPNFQARNPHQQQYVQRSPMQNHQLFQSQQQQQWLRR
NQLGGESSIDEVEKTVQSEAVDSSSQDWKARLKAPPPDTRYRTEDVTATKGNEFEDYFLK
RELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNV
IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR
ILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSVEQLIRFLTPNRQILMFSATFPVTVK
DFKDRYLPKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVN
RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV
VINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHID
QAIYCQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcgaggacggtatccgccggggatcggcggccttggtggccgcgggggaggc
ggcagtgccagccctaattttcaggcgaggaaccctcaccagcaacagtacgtgcaaagg
agtccaatgcagaaccatcagctgtttcagagccagcaacagcagcagtggctgaggagg
aaccaattagggggcgagtcgagcattgatgaggtcgaaaagaccgtacagtcggaggct
gttgactcaagttcacaagattggaaggcacggttgaaggctcctccacctgatactcgg
tacagaactgaggatgtgacagccactaaaggcaatgagtttgaagactattttcttaag
cgtgagctactgatgggcatatatgagaaagggtttgaaagaccatctcctattcaagag
gaaagcattccgattgcattaacagggagcgatattcttgccagggctaaaaacggaact
ggaaaaactgctgccttttgtattcctgctttggaaaaaattgatcaagataacaatgtt
atccaagttgttatacttgttccaactcgagaattggctctacaaacatcccaagtctgt
aaggagcttggaaagcacctcaaaattcaagtcatggttaccactggtggaacaagctta
aaagatgacataatgcgtttgtatcaaccagttcacttacttgtcggaactcctggaaga
atactagatcttgctaaaaaaggtgtttgtgttttgaaagattgctcaatgctcatcatg
gatgaggctgataagctattgtctccagaattccaaccttcagtggagcagttgattcgc
tttctaactccaaatcgtcaaatattgatgttttcagccacatttcctgttactgttaag
gattttaaggatagatatctaccgaagccctatattattaaccttatggatgagcttact
ctcaagggtataacacaattttatgcttttgttgaagagaggcagaaagtccactgtcta
aacactctgttctcaaagctccaaatcaaccaatcaatcattttctgtaattcggtgaac
cgggtagaattgctggctaagaagatcacagagcttgggtattcttgcttctatattcac
gcaaagatgcttcaagatcatcggaacagagtatttcatgatttccgtaatggtgcatgc
aggaatcttgtttgcacggatctgtttacaagggggatagacattcaagcagttaatgtc
gtgattaattttgatttccccaagaattcagaaacttatttacatagggttggccgatca
gggagatttggacaccttggattagcagtgaatttgatcacttatgaggaccgtttcaat
ttgtataggattgagcaagaacttggcactgagataaagcaaattcctcctcacattgac
caggctatttactgccagtga
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