Diospyros lotus (date-plum): 127801377
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Entry
127801377 CDS
T10632
Name
(RefSeq) squalene synthase 1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt00100
Steroid biosynthesis
dlt00909
Sesquiterpenoid and triterpenoid biosynthesis
dlt01100
Metabolic pathways
dlt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
127801377
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
127801377
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dlt01006
]
127801377
Enzymes [BR:
dlt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
127801377
Prenyltransferases [BR:
dlt01006
]
Terpene biosynthesis
Squalene/phytoene synthase
127801377
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
127801377
NCBI-ProteinID:
XP_052192372
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Position
5:complement(35696851..35708415)
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AA seq
415 aa
AA seq
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MGSLAAMLRHPDDVYPLVKLKMAARHAEKQIPPEPHWAFCYTMLHKVSRSFGLVIQQLGT
ELRNAVCIFYLVLRALDTVEDDTSIATEVKVPILLAFHRHIYDRDWHFSCGTKEYKVLMD
EFHHVSTAFLELGKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASGLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKYKENSVKSVQCLNDMVTNALIHVDDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDQTKTISDVYGAFFDFSCMLKSKVEKNDPNSTKTLSRI
EAIQKTCRESGTLSKRKSYILKSQPTHNSTLIFVLFIILAILFAYLSANRPPINM
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtttggcagcgatgttgaggcatccagatgatgtgtatcctctagtgaagctg
aagatggcggcgaggcacgcggagaagcagattccgcctgagccacactgggccttctgc
tacaccatgctccacaaggtctctcgaagtttcggcctcgttattcagcagctcggcacc
gagctccgcaacgccgtatgcattttctatttggttcttcgagcactcgatactgttgag
gacgatacaagcatagccacagaggtcaaagtacctattctactggcttttcatcgtcat
atatatgaccgtgactggcatttttcatgtggtacaaaggagtacaaggttctgatggac
gagttccatcatgtttcaacagcgtttttagagcttggcaaaggttatcaggaagcaatt
gaggatattaccatgaggatgggtgcaggaatggcaaagtttatttgcaaggaggtagaa
acaattgatgattatgatgaatactgtcactatgtagccggacttgtcgggctgggatta
tcaaagcttttccatgcctctggcttggaagatttggcaccagattctctgtccaattct
atgggtttatttcttcagaaaacaaacattattcgagactatctggaagatataaatgaa
ataccaaagtcacgcatgttttggcctcgacagatatggagtaaatatgttaacaaactt
gaggacttaaaatataaggaaaattcagttaaatcagttcaatgcttaaacgacatggtt
acaaatgccttaatacatgtggacgattgcttgaaatacatgtcagctctgcgagatcct
gccatcttccgattttgtgcaattccacagatcatggcaattggaaccttagctttatgc
tacaacaacattgaagtcttcagaggtgtagtaaaaatgaggagaggtcttactgctaaa
gttattgaccagacaaaaaccatttcagatgtctatggtgctttcttcgatttttcttgc
atgctgaaatcaaaggttgaaaaaaatgatcccaattctacaaaaacattgagcaggata
gaagcaattcagaaaacttgcagagaatcaggaaccttgagtaaaaggaaatcttacatc
ctcaagagccaaccaacacacaattcaactctgatatttgtgttattcattatacttgcc
atcttgtttgcttatctatctgcaaacagaccaccaataaatatgtga
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