Diospyros lotus (date-plum): 127801452
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Entry
127801452 CDS
T10632
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127801452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127801452
03009 Ribosome biogenesis [BR:
dlt03009
]
127801452
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127801452
Ribosome biogenesis [BR:
dlt03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
127801452
Pre-60S particles
127801452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
IBN_N
TPR_IMB1
TOR1L1_N
HEAT_2
TPR_DNAAF5
HEAT_MROH2B_C
HEAT_EF3_N
CEP104-like_TOG
TIP120
Nipped-B_C
PSME4_C
Motif
Other DBs
NCBI-GeneID:
127801452
NCBI-ProteinID:
XP_052192589
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All DBs
Position
5:complement(33159288..33241774)
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AA seq
888 aa
AA seq
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MAATASWQPQEEGFKEICGLLEQQISPTSDKSQIWKQLQHYSQFPDFNNYLAFILARAEG
KPMEVRQAAGLLLKNNLRTAFKSMAPPYQQFIKSELLPCMGASDRHIRSTAGTIISALVQ
INGIVGWPELLNTLVRLLDSNELNHMEGAMDALSKICEDVPQVLDSDLPVSTERPINVFL
PRFLQFFQSQHASLRKLALASVNQFIMLLPQVLYMSMDTYLQGLFVLANDPVADIRKLVC
GAFVQLIEVRPSVLEPHLRNVIEYMLQVNKDHDDEVALEACEFWSAYCEVQLPPDNLREF
LPRLIPVLLSNMVYADDDESLVDAEEDGSMPDRDQDLRPRFHSSRLHGSENAEDEDDDIV
NIWNLRKCSAAALDMLSNVFGDEILPPLMPIVQAKLPTIDDAAWKDREAAVLALGAIAEG
CINGLYPHLPEIVSFLIPRLDDKFPLIRSISCWTLSRFSKFIVQGIGYQEGREQFDKVLM
GLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEVILQHLMCAFGKYQRRNLRIVYD
AIGTLADAVGGELNEPKYLEIMMPPLIAKWQQLSDSDKDLFPLLECFTSIAQVLGTGFSQ
FSQPVFQRCINIIQSQQLAKVDPASAGVQYDREFMVCSLDLLSGLTEGLGSGIESLVSQS
NLRDLLLQCCMDDASDVQQSAFALLGDLARVCPIHLQPRLSEFLDVASKQLNTRRLKETI
SVANNACWAIGELAIKVRQAVSPIVLTVISSLVPILQHAEELNKSLIENSAITLGRLAWV
CPELVSPHMEHFMKPWCIALSMIRDDIEKEDAFRGLCALVRANPSGALSSLVFMCKAIAS
WHEIRSEDLHKEVCQVLHGYKQMLDGAWDKCMSALEPPVKDKLSKYQL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacggcgtcgtggcagcctcaggaggaagggttcaaggagatctgcggcttg
ctcgagcagcagatttctccgacttccgataagtcccagatttggaagcaactccagcac
tactctcagtttcccgatttcaataattacctcgccttcatactcgcccgcgccgagggc
aagccaatggaggttcggcaggctgctggattgctattgaaaaataaccttagaactgct
tttaagtccatggctcctccatatcagcagtttataaaatcagaattgttgccttgtatg
ggagcatcagataggcacataagatctacagctggtaccattataagtgcacttgttcag
ataaatgggattgttggatggcctgaactgcttaacacccttgttaggttgctggatagt
aatgaattgaatcacatggaaggtgccatggatgcattgtccaagatttgtgaggatgtt
ccccaagtgctcgattctgatttgcctgtatcaactgaacggccaatcaatgtattcctt
cctagattcttgcagttttttcagtcacagcatgcctcactcagaaaacttgcgttggcc
tctgtaaatcaattcattatgttgttgccccaagttttatacatgtccatggatacttat
ctacaaggtttattcgttcttgcaaatgatcctgtggcagatattcggaagttggtctgc
ggggcatttgttcagttaattgaagttcgtccgtctgtcttggagccacatctaaggaat
gtaattgaatacatgttgcaagtcaacaaagatcatgatgatgaagttgcccttgaagct
tgtgaattttggtctgcatattgtgaagttcagttaccacctgataacctaagagaattc
ttgccacgcctaattccagttctgttgtcaaacatggtttatgccgatgatgatgagtcc
cttgtggatgcggaggaagatgggtcaatgccagatcgagatcaggatctgaggccccgc
tttcattcatcacgtttgcatggatctgagaatgcagaagatgaggatgatgacatagtc
aacatttggaatttacggaagtgcagtgcagctgctttggatatgctctcaaatgtgttt
ggtgatgaaattttaccaccattgatgcctatagttcaggctaagttacccactattgat
gatgcagcctggaaagatagggaggctgcagttttagctcttggtgccatagcagagggt
tgcatcaatggtctttatccccatttaccagagattgtttcatttcttattccacgtttg
gatgataagtttcccttgatacgaagcatctcatgttggacactttctcggtttagtaag
tttattgttcagggtataggttatcaagaaggccgtgagcaatttgataaggtcctaatg
gggcttcttagaagaatattggatgataacaagcgtgttcaagaggctgcttgttcagct
tttgctactcttgaagaggaagctgctgaagagttggctccacgcttggaagttatcctg
cagcacttaatgtgtgcttttggaaaatatcagaggcggaatctcagaattgtgtatgat
gctattggaactctagcagatgctgttgggggagaactaaatgagcccaagtaccttgaa
attatgatgccaccgttaattgcgaagtggcaacaactttcagattctgataaagatctt
ttcccactgctggagtgctttacatctatagcacaggtattgggtaccggattttcacag
ttttctcagcctgtgttccagaggtgcataaacattatccagtcccaacaattggcaaag
gttgatccagcttcagctggggttcaatatgatagagaattcatggtgtgctctctggac
ttgctctctggacttactgaaggtcttggaagtggcatagagagcttggtttcacaaagt
aatttgagggacttgcttctccaatgttgcatggatgatgcttcagatgtccaacaaagt
gcctttgcattgcttggtgaccttgcaagggtttgtcctattcatttgcagccacgttta
tcagaatttcttgatgttgccagtaagcagctgaacactcgtaggctgaaggaaactatt
tccgttgcaaacaatgcatgttgggcaattggagaattagcaattaaggttcggcaagca
gtttctccaatagtgttgacagtcatttcatccttggtcccaattcttcaacatgctgag
gagctcaacaagtcacttatagaaaatagtgccatcacacttggacgacttgcctgggtt
tgtccagaacttgtatctccacatatggagcatttcatgaaaccatggtgtattgcctta
tcaatgatacgggatgatattgagaaggaagatgccttccgaggtctatgtgctctggtt
agagcaaacccgtctggggctttgagttcacttgttttcatgtgcaaagctattgcaagt
tggcatgaaataaggagtgaggatctacacaaagaagtttgccaggtgttgcacggttat
aaacagatgctagatggagcgtgggacaagtgcatgtctgctttggagcccccagtgaag
gacaagttatcaaaatatcagctctga
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