Diospyros lotus (date-plum): 127801624
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Entry
127801624 CDS
T10632
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127801624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127801624
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127801624
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127801624
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-Di19
DUF7567
Motif
Other DBs
NCBI-GeneID:
127801624
NCBI-ProteinID:
XP_052192862
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Position
5:complement(19830050..19838206)
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AA seq
320 aa
AA seq
DB search
MELDSIECVPQSLDGMDQDDIHRRLLQPQFSSSKPQGNVVSRAVHQTANTPIHELLECPV
CANSMYPPIHQCHNGHTLCSTCKARVYNRCPTCRQELGDIRCLALEKVAESLELPCKYCS
LGCLEIFPYYSKLKHEAICNFRPYNCPYAGSECTVAGDIPYLVSHLRDEHKVDMHSGCTF
NHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEIEARSY
GYSLEVGGHGRKLIWEGTPRSIRDSHRKVRDSHDGLIIHRNIALFFSGGDRKELKLRVTG
RIWKEQQATDGGAFIPNICS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggagttggacagcattgaatgcgtgccccaatccttggacgggatggatcaggacgac
atccatcgtcgtcttcttcaacctcagttctcgtcttccaagcctcagggaaacgtcgtt
tctcgtgccgttcatcagactgcaaacactccaatacacgagcttctcgaatgcccagtt
tgtgccaattcaatgtaccctccaatacaccagtgccacaacgggcacactctctgttcc
acctgtaaagcaagggtatacaaccgctgtcccacctgcagacaggagctcggtgatata
aggtgtctagcgctagaaaaggtagctgaatcacttgaactgccttgcaaatattgttct
ctcggctgccttgagatattcccctactacagcaagcttaaacatgaggctatatgcaac
tttagaccatacaactgcccctatgctggatcagagtgcactgttgcaggggatattcca
tacctagtttcccatcttcgagatgaacataaagtggacatgcactctggatgcacattt
aaccatcgctatgtcaagtccaatccacgcgaagtagagaatgccacatggatgctaact
gtcttcaattgttttggccagtacttctgtctccatttcgaagcttttcagcttggaatg
gctcctgtctatatggcattcctgcgattcatgggcgacgaaatagaggcccgaagctat
ggttacagcctggaggttgggggacatggccgaaaactcatttgggagggcaccccacgg
agcataagggacagccacaggaaagtaagggacagccatgatggtctaattatacaccga
aacatcgcacttttcttctctggaggggacaggaaagaactcaagctgcgagtaacaggt
cgaatatggaaagagcagcaggccacagatggtggagctttcatacctaacatctgtagc
taa
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