Diospyros lotus (date-plum): 127801805
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Entry
127801805 CDS
T10632
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dlt01009
]
127801805
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127801805
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127801805
Protein phosphatases and associated proteins [BR:
dlt01009
]
HAD phosphatases
Fcp/Scp phosphatases
127801805
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127801805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
HEPN_Toprim_N
Motif
Other DBs
NCBI-GeneID:
127801805
NCBI-ProteinID:
XP_052193178
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All DBs
Position
5:complement(235269..246329)
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AA seq
661 aa
AA seq
DB search
MGRAEEISVKEAVHKLQLSLLEGIQNEDQLFAAGSLISRSDYQDVVTERSIANTCGYPLC
RNALPPERPRKGRYRISLKEHRVYDLNETYMYCSTGCVVNSRAFAGSLQEERCSVLSSAK
LNEILRLFESLGLDREAGLGKNEDLGLSELRIQEKTDVKAGQVSLEEWIGPSNAVEGYVP
QRDRNSQPLRTKTREEGSQLNHAKPIKGKNVMFDEMDFRSTIICQDEYNISKTLPGSVTA
VKNAKSKQSKEKHSSKQVEHQFTIMEMPLASVHTDSAIVKEPEGEKGSIRTSDKLGISEG
LSQLCQNSPDINVAGAREGTSAVKAAQFSATVPKSALKSTGAKKQSRSVTWADEKSDGAE
NRNLCEVRDLENTKDHADKVRFPDQGDNDSSVRFLSAEACAIALGQAAEAVASGDYDITD
AVSEAGIIILPPPQDVDEGKSQEQVNMVEPEPTTSKWPKKPGVPNYNLFDSEDSWYDSPP
EGFSLSLSPFATIWSALFEWISSSSVAYIYGRDDSFREEYFSVNGREYPHKIASTDGRSS
EIKQTLAGCLARALPGLVEDLRLPVLLSTLEHELGHLMETMSFVDPLPPFRMKQWQVIVL
LFIDALSVSRIPALTPHMTSRRTLLRQVLDGAKISAEEYEIMKDLIIPLGRVPEFSTQSG
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgggaagggcagaagaaatttctgtgaaggaagcagttcacaaacttcagctttctctt
ctagagggcatacaaaacgaggaccaactctttgctgctggctcactcatatctcgcagt
gactaccaagacgttgtcaccgagcgatccatagccaacacgtgcggttaccctctctgc
cgcaacgctttgccccccgagcggcctcggaaggggcgctatcgaatttcattgaaagag
catagggtttatgatcttaacgaaacctacatgtactgctcgacgggttgcgtcgttaat
agccgagcatttgctgggagtttgcaggaggagaggtgttcggtgctgagttcagcgaaa
ctgaatgagattctgagattgttcgagagtttgggtttggatagggaagcgggtttgggg
aagaatgaggatctggggttatctgagttgaggattcaggagaagacggatgtgaaggct
gggcaagtgtctctggaagagtggattggcccttcaaacgccgttgaaggctatgttcct
cagagggatcgaaattcccagcctttgcgtaccaagactcgagaagaaggatctcaactt
aatcacgccaagccaattaagggaaaaaacgtgatgtttgacgagatggatttcaggagt
actataatctgtcaagacgagtataacatttcgaaaacacttccaggttcagtcacagct
gttaagaatgcaaaatctaaacaatcaaaagaaaagcatagtagtaaacaagtggaacat
cagtttaccataatggaaatgccacttgcttcagtgcatactgattctgcaattgtaaaa
gaacccgaaggagagaagggtagcatccggacaagtgataaacttggaatttcagaaggt
ttatcacaactttgtcagaatagtcctgatataaatgttgctggagcaagagagggaact
tctgctgtaaaagcagctcagtttagtgcaactgtaccaaaatctgctcttaaatctaca
ggtgcaaagaaacagtcaaggtctgtgacatgggctgatgagaaaagtgatggtgcagaa
aatagaaatctctgtgaggttagagacttggaaaatacaaaagatcatgctgacaaggtc
agatttccagaccagggggataatgatagttcagttcgatttctttcagcggaagcatgt
gccattgcactgggccaggcagcagaagctgttgcatctggagattatgatataactgat
gcggtatcagaagctggaattattatactaccccctccccaagatgtggatgaaggaaaa
tcccaagagcaggtcaatatggttgaaccagagccaactacttctaagtggccaaaaaaa
ccaggggttccaaattataatttgtttgattctgaggattcttggtatgatagtccacca
gagggctttagccttagtctatcaccatttgcaacaatatggagtgcactgtttgagtgg
atatcatcatcttctgtggcttatatatatggacgggatgatagtttccgtgaagaatat
ttttctgttaatggaagagagtacccccacaaaattgcatcaactgatggccgttcttct
gaaataaaacaaactcttgctggctgtcttgctcgtgctttgccaggacttgttgaagat
ctcagactaccagttctattatctactctggagcatgaattggggcacttaatggagact
atgtctttcgttgatccacttcctccattcagaatgaagcagtggcaagtgattgtactt
ttgtttattgatgctctctcagtttcaagaattccagcacttactccacacatgacaagt
cgcaggacattgcttcgccaggtactggacggtgctaagataagcgcagaagagtacgag
ataatgaaggatctgataataccacttggtcgggttccggaattttcaacacagagtggg
ggttga
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