Diospyros lotus (date-plum): 127801837
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Entry
127801837 CDS
T10632
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127801837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127801837
03036 Chromosome and associated proteins [BR:
dlt03036
]
127801837
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127801837
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127801837
PBAF complex
127801837
GBAF(ncBAF) complex
127801837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
127801837
NCBI-ProteinID:
XP_052193243
LinkDB
All DBs
Position
5:complement(36940247..36959453)
Genome browser
AA seq
1011 aa
AA seq
DB search
MEEKRKDTGNPPAGSSAAAGTPQKPAEVAPAAEAPSSRRRGGGQKRKAGSGGGGNASTPP
TSSSKRQAREKPSVAASHAPIHNGPCTRARQTPSGAAGVGSSSVGASFGAAMKNEKEGMV
TLESGGGEKAKAGEETGMVEEDWEALEEKIEAEYEAIRSRDVNAHVVPAPAGWFSWTKVH
PLEERALPSFFNGRSKDRTPEMYKEIRNWIMRKFHANPSILIELKDLSELSVGELDARQE
VMEFLDYWGLINYHPFPENDTAMVSSDGDGASKTDSLVEKLYCFEAEQSCVPVVPKNSVT
TPAVPSGLFPESAIAEELMRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNNG
KFDSDMSPMDFILMEPAEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQ
CILHFVQMPIEDTFMDCDEETDAGLKENGDHAKATSDSSTPKDATERTEGEGAANENHPQ
SSPMKISMPEDSNELKVGQEINENFALKALKDAFEAVGSFPTPGNQFSFADAGNPVMALA
AFLVRLVEPNVVTAMACKSTKSIYSNSFSMQLAARHCFLLEDPPDDKKSADSDRAATETV
EQDTQKNEKENEIKQKEEKSNSVLNDGGLPNDHNNEKDQDSIREKKELSGSPVECVEKSH
TVNDTDVIGTHEKGQFHSLNESENPDMPKDQATRDAKESDCLASGSEICPSSLKDPGDRT
PDVIRIHDEGSLVSLTESDKPDLPNHPSRAGKESDVLIPEKEAPSNFDKVPGAGASDEVP
SQCTDSAKDAVAVPDSLPSDKGEPEEPITSNPIPITENGRNTGEEETKDCHNSENEAFPK
TKDDHNIYKLKRAAVTALSAAAVKAKLLADQEEDQIRQLATLLIDRQLHKLEAKLMFFTE
MESLVMRVREQMERSKQRLYQERAQIIASRLGAFPASSSRPMQQSLLINRAAMGFANSAL
RPLMSIPSQRPPMSRSMMTSIPTTNPFVPATASGNPVRPTNQDKISSVVTK
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagcgcaaggataccgggaatccgccggcggggagttctgcggccgccggg
acgccccagaagcctgcggaggtggcgccggcggccgaggcaccttcttcgaggcggaga
ggcggtgggcagaagagaaaagccggcagcggcggtggcggaaacgcatcgacgccacca
acgagttcatcgaagcgtcaagctcgtgagaagccctcggtggcggcctctcacgctccg
atccacaacggtccgtgcaccagagctcgccagacgccgagcggtgccgccggagtgggg
tcgtcctccgtgggcgcgtcgtttggtgcagctatgaaaaatgaaaaggaggggatggtg
acactggagtctggcggtggagagaaggcaaaggcgggggaggaaacggggatggttgaa
gaggattgggaggcgttggaggaaaagattgaagctgaatatgaagcaattagatctcgc
gatgttaatgctcatgtggttccagctccagccggttggttttcatggacaaaggttcat
ccgttagaggaacgagcattgccttccttcttcaatggcaggtcaaaagataggactcct
gaaatgtataaggagatacgtaactggattatgagaaagtttcatgctaaccctagtata
ctaattgaactgaaagatttatcggagctttccgtcggggagttggatgctaggcaagag
gtgatggagtttttggactattggggtttaattaattaccatccatttccagagaatgat
actgccatggtgagctctgacggtgatggggcatcaaagacagattctttggttgaaaag
ttgtactgctttgaagcagaacaatcatgtgtcccagtggttccaaaaaatagcgtgaca
actccagctgtgccatctggtttgtttccagagtctgccatcgctgaagagttgatgagg
cctgaggggccatctgttgaatatcattgcaattcttgttcagctgattgctcacgcaag
cgctaccattgccagaagcaggcagattttgatttatgttctgaatgcttcaataatggg
aagtttgactctgatatgtccccaatggatttcattctcatggagcctgcagaggctgct
ggtgtaagtggagggaagtggactgaccaggagactctcctcctccttgaagcattggaa
ctttataaagagaattggaatgagattgctgagcatgttgctacaaaaacaaaagctcaa
tgtatcttgcattttgttcaaatgccaattgaagatacttttatggactgtgatgaagaa
actgatgctggtcttaaagaaaatggggatcatgctaaagcaaccagtgattcatctact
ccaaaagatgcaacagaaagaacagagggtgaaggtgctgcaaatgaaaatcaccctcag
tcttccccgatgaagatttcaatgccagaagattccaatgaactgaaagttggtcaggaa
atcaatgagaattttgcactaaaggcactcaaggacgcatttgaagctgtggggtctttt
cctacacctgggaaccaattttcatttgctgatgctggaaaccctgttatggcattggca
gcattcctggtaagattggtggaacccaatgtagttactgccatggcctgtaaatctaca
aaatccatttatagcaactctttcagcatgcagctggctgctaggcattgttttcttctg
gaagatcctccggatgacaagaaatcagctgattctgacagggctgctactgaaacagtt
gagcaggacactcagaagaatgaaaaagagaatgagataaagcagaaagaggagaagtct
aactcagttttgaatgatggtggtttaccaaatgatcacaataatgaaaaagatcaggat
tctattagagaaaagaaggaactgtcaggttctcctgttgaatgtgtagagaagtctcac
actgtaaatgatacagatgtgataggtacccatgaaaagggacaattccattctttgaat
gaatccgagaacccagatatgccaaaagaccaagcaacaagagatgcaaaagaatcagat
tgcttggcatctggatcagagatttgtccaagttctttgaaggatcctggtgatagaact
ccagatgtcatcagaattcatgatgagggaagtcttgtctctttaactgaatcagataag
ccagatttgcctaatcacccatcaagagctggaaaagaatccgatgtcctgatacccgaa
aaagaggcgccttcaaattttgataaggttccaggtgctggagcttcagatgaagtgccc
tcacaatgcacagactctgcaaaggatgcagttgcagttccagattctcttccttctgat
aagggagagcctgaggagccaatcacatcaaatccaattccaattactgaaaatggaaga
aatacaggcgaggaagaaacaaaagattgtcacaattctgagaacgaagcatttcctaag
accaaagatgaccacaatatttataaattgaagcgagctgctgtcactgcactatcagct
gcagcagtgaaagcaaagcttcttgcggaccaggaagaagaccaaattcgacagcttgct
accttgttgattgatagacagttacacaagctggaagccaaattaatgttctttactgag
atggaaagtttggtaatgagggtcagggaacaaatggaaaggtctaagcagaggctttac
caagagcgagcacagataattgcatctcgtcttggtgcctttccagcttcatcttctaga
cctatgcaacaatcattacttatcaacagagcggctatgggttttgctaactcagcattg
aggcccctaatgagcataccctctcaaagaccaccaatgtcaagatccatgatgacatcc
attcctactacaaatccttttgtacctgctacagcatcaggaaatcctgttaggcctacc
aaccaggacaaaatttcttcagttgtaacaaaataa
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