KEGG   Diospyros lotus (date-plum): 127801862
Entry
127801862         CDS       T10632                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03018  RNA degradation
dlt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127801862
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127801862
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dlt03019]
    127801862
   03041 Spliceosome [BR:dlt03041]
    127801862
Messenger RNA biogenesis [BR:dlt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127801862
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     127801862
Spliceosome [BR:dlt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    127801862
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 127801862
NCBI-ProteinID: XP_052193310
LinkDB
Position
5:complement(7096870..7103240)
AA seq 99 aa
MSNRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtccaataggaaagagactgttctggatttggcaaagtttgttgacaagggtgttcaa
gtcaagcttactggtggaagacaagtaacagggaccctgaaaggatacgatcagttgttg
aacctcgtcttggatgaagcgatagagttcctaagagatccggatgatcctctgaagact
actgatcaaacaaggcgtcttggcttaattgtgtgtcgggggactgcagtaatgcttgta
tcgccaactgatggaacagatgagattgctaatcctttcctccagccagatggggcctag

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