Diospyros lotus (date-plum): 127801865
Help
Entry
127801865 CDS
T10632
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127801865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127801865
03009 Ribosome biogenesis [BR:
dlt03009
]
127801865
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127801865
Spliceosome [BR:
dlt03041
]
Complex A
U1 snRNP components
U1 related factors
127801865
Complex B
127801865
Ribosome biogenesis [BR:
dlt03009
]
Eukaryotic type
Pre-60S particles
Helicases
127801865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
Cas3-like_C_2
OapA_N
Motif
Other DBs
NCBI-GeneID:
127801865
NCBI-ProteinID:
XP_052193316
LinkDB
All DBs
Position
1:33468771..33502296
Genome browser
AA seq
577 aa
AA seq
DB search
MSYMPPHRRNSTASKITTTSTTLETPTSTATATATATASTTTATDHYKKLHSNSSHLPQS
RNATANSKINSSSSLSRRSSVNFSVPDAVFPLWKPSERVLRFTPEQIEEVRLRLNVDVTI
ASDSTPTPAPIESFTDMSLHPSIMEDIAFHSYSTPTSIQAQAMPVALSGRDLMGCAETGS
GKTAAFTIPMIQHCLAQPPICRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFRTAIV
VGGTNIADQRSELRAGVNIVVATPGRFIDHLQQGNTSLSRVSFVVLDEADRMLDMGFEPQ
IREVMQNLPKKHQTLLFSATMPVEIEALAQEYLTDPVRVKVGKVSSPTANVAQILEKVPE
NEKIDHLLSLLVEEANHTERSSHPFPLTIVFVERKTRCDEVAEALVAEGLHAVAFHGGRS
QSEREAALRDFRTGFTSILVATDVASRGLDVTGVAHVINLDLPKTMEDYVHRIGRTGRAG
SMGQATSFYTDRDMFLVVQIKKAIADVRSGNTVAFATGKIARRKEREAAAAHKEERIALS
KLPVMGPTSINIEDKYRYMVAPSMVKAEGAADGAWDD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatatgcctccgcatcgcaggaactcaactgcctccaagatcactactacctct
acaaccctagaaacccctacgtccaccgccaccgccaccgccaccgccaccgcctctact
actaccgctactgatcactataaaaaacttcactctaactcctctcaccttcctcaatcc
cggaacgccaccgccaacagcaaaatcaactcgtcttcctccttgtctcgacgcagctcc
gtcaacttttccgttcccgacgccgtattccccctctggaagccctccgaacgcgttctc
cgtttcactcctgaacagattgaggaggtacgcctgcgccttaatgtggatgttactata
gcttcagactccactcctacaccagcaccaatcgaatcattcacggatatgagcttgcat
cctagcatcatggaagacattgcctttcacagttatagcacacccacctctatacaggct
caagctatgccggttgctctaagtggaagggatcttatgggttgtgctgaaactggcagt
ggaaaaactgccgcattcaccattccaatgatacagcattgcttggcacagcctcccatt
tgccgtggtgatgggcccttggctttggtactggctccaacaagagagcttgcacaacaa
atagaaaaagaggttaaggcttttagcagatctctagagtccttcagaacagcaatagtt
gtgggtggaacaaacattgctgatcagaggtctgagttgcgagcaggagtaaatatagtg
gttgccactcctggacgattcattgaccatttacagcaaggaaacacttctctttctagg
gtttcatttgttgtgttggatgaagctgacagaatgcttgatatgggttttgagccacag
ataagagaggtgatgcagaatcttccaaaaaagcatcaaactttgctgtttagtgcaacc
atgccagtggagatcgaagcacttgcacaggagtacttgactgatcctgtaagagtaaag
gtaggaaaagtgagtagcccaacagcaaatgtagcccaaattttggagaaggttccagag
aatgagaagattgaccatcttttatcactgcttgttgaggaggctaatcatactgaaaga
tctagtcacccgtttccattgaccattgtctttgtggagaggaagactaggtgtgatgaa
gttgcagaagcattggtagctgaaggtttgcatgcggttgcctttcatgggggccgtagt
caaagtgagagagaagctgctctccgtgattttaggactggttttacaagtatattggta
gccaccgatgttgcatcacgtggattggacgtcactggtgttgctcatgttattaatctt
gatcttccaaagaccatggaagactatgtgcatcggattggaaggacaggacgcgcagga
tcaatgggccaagctacttcattttacactgatcgagacatgttccttgtggtacaaata
aagaaagcaattgcagatgttcggtctggtaatactgtggcctttgcaactggcaagatt
gctagaaggaaggagagagaagcagcagctgcccataaagaagaaaggattgcgctgtcc
aaactcccagttatggggcctacatcaattaacatagaggacaagtacagatatatggta
gctccatccatggtcaaagcagaaggtgctgcagatggtgcttgggatgactaa
DBGET
integrated database retrieval system
