KEGG   Diospyros lotus (date-plum): 127801960
Entry
127801960         CDS       T10632                                 
Name
(RefSeq) protein RAE1 isoform X1
  KO
K14298  mRNA export factor
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dlt00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127801960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dlt03019]
    127801960
   03036 Chromosome and associated proteins [BR:dlt03036]
    127801960
Messenger RNA biogenesis [BR:dlt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127801960
Chromosome and associated proteins [BR:dlt03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    127801960
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_IFT140_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_Nup120_160 Vitelline_membr Beta-prop_BBS7
Other DBs
NCBI-GeneID: 127801960
NCBI-ProteinID: XP_052193481
LinkDB
Position
5:42181022..42224916
AA seq 349 aa
MATFGAASTANHNPNKSIEVTQPPNDSISSLIFSPKANFLVATSWDNQVRCWEIMRTGAT
VGSVAKASISHDQPVLCSSWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKEI
AWIPEMNLLVSGSWDKTLRYWDLRQSNPVHTQQLPERCYAFTVKHPLMVVGTADRNLIVF
NLQNPQTEFKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDSQQNKNFTFKCH
REGNEIYSVNSLNFHPIHHTFATAGSDGAFNFWDKDSKQRLKAFSRCSQPIPCSTFNNDG
SIFAYSVCYDWSKGAENHNPSTAKTHILLHLPQEVEVKGKPRIGTSGRK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggctactttcggagctgcttcaacggccaatcacaaccccaacaagtcgattgaggtg
acacaacctcctaatgattctatatcaagtcttatcttcagtccgaaggccaatttcctc
gtggcaacttcatgggataaccaggtgcggtgttgggagataatgcggactggggccact
gttggcagtgtggccaaggcatcaatatcacatgaccagccagttctttgttcaagttgg
aaggatgatgggactactgttttttctgggggatgtgacaaacaagtaaagatgtggcca
ttactctctggtggtcaaccagtgactgtcgctatgcacgatgcacctgtcaaggaaatt
gcatggatcccagagatgaatctactagtcagtggaagttgggacaagactctaaggtat
tgggatctgagacagtcaaatccagttcacactcaacaacttcctgagcgctgctatgca
tttactgtcaaacatccactcatggtagttgggactgcagatagaaatcttatagttttc
aacttgcagaaccctcagactgagtttaaaaggatcacttcacccctgaagtatcagaca
aggtgtgttgctgcctttcctgatcagcaaggtttcttggttggttcgattgagggaagg
gttggtgtacatcatcttgatgattcacaacaaaataaaaacttcactttcaaatgtcat
agagagggcaatgaaatatactcagtcaactcattaaacttccatcctatacaccacaca
tttgcaactgcaggatctgatggtgctttcaatttttgggacaaggacagcaaacagaga
cttaaggccttttcaaggtgcagtcagcctataccgtgcagtacattcaacaatgatggc
tcaatattcgcttactcggtgtgttatgattggagcaagggtgcagaaaatcataatcca
tcaactgcaaaaacccacattttactgcacttgccacaggaagttgaggtaaaaggaaaa
ccacgaattggaaccagcggcagaaagtga

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