Diospyros lotus (date-plum): 127802093
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Entry
127802093 CDS
T10632
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127802093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127802093
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
127802093
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
127802093
NCBI-ProteinID:
XP_052193743
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Position
5:10719198..10722684
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AA seq
905 aa
AA seq
DB search
MPFGPESRKRELEVHDEVEHGSSYWTRSKAGSRRKPPETAKTVSSSDSDLSMTSGETTDD
DSSDEDFDVLSVRKRAPRSKMKEVDEQEQDGDSSKGDDEKNDESVSRKEFPGKNSQKVRL
SSSIGQQVEEQRGFKEGCRIFRTLLYSILDEKNIVLEEQASKQAKNLPSTEHALPLKFTF
ELEKPELVEKSDIDKITDDLFAEMQFAIRSEEMGSSPRTGDGAGPEAERNQTTPFCHGKH
NFILDEEIGIKCSYCSIVELEIKYVTPSFGEYLFARETSNNEYVSASKDFSMFDGFKFEG
SKACLQDPCNHAEGTVWDVLPGKKESMYPHQIEGYEFLWRNLAGTTRLSELGKADASRVG
GCMISHAPGTGKTRLTIVFIETFLTLFPNCLPVVVAPAGMLLTWEEEFRKWKVQFPFHNL
NNPEVSGQENATSTGLLSKSVFQSKNALRMVKLHSWSKGKSVLGISYTLYEKLAGTKYVQ
AEGKNKRKKLTRGKEDELLRKILLELPGLVILDEGHTPRNQRSGIWKTLLQLQTKRRIIL
SGTPFQNNFEELFNTLHLVRPAVADMISSGGRRYYRKQLRGKRAFVYGSSGKEVDTIEKL
KATISPFVHVHKGSILQQSLSGLRDCAVLLYPSQLQMEIIKTLQPSANTFEFEHKVALVS
VHPSLLLQCKETSVSDPNVLEQHRLDPYQGVKTRFIMELIRLCVATKEKVLIFSQYIDPL
ELIKDQLKSIFNWHEGREVLQMHGTLEQRCRQKFIGIFNDSGSEAKVMLASIKCCSEGIS
LIGASRVVLIDVVWNPSVERQAISRAYRLGQEKVVYTYNLMASGTTEGEKYCRQVEKNRL
SELFFSSGSKEREEKNRATTFNDVILEEMVAHGKLKDMFERIIYQPKQTNLVEKISIPHP
IPGSS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgccatttggtcctgaaagtaggaaaagggaactggaggttcatgatgaagttgaacat
ggcagttcttactggacgcgttcaaaagcaggatctagaaggaagcctccagagactgct
aaaactgtctccagtagtgactcggatctatcgatgacttctggtgaaacaactgatgat
gattcaagtgatgaggattttgatgttttgtctgttaggaagagggcaccaaggtctaag
atgaaggaggttgatgaacaagaacaggatggtgacagtagcaagggagatgatgaaaaa
aatgatgaatctgtgagcagaaaagaattcccagggaagaatagtcaaaaggtaaggctc
agttcttcaattgggcaacaggtggaggagcaacgcggattcaaagaaggttgccgtatc
tttaggactcttctttattctattttggatgaaaagaatattgtacttgaagagcaggca
tctaaacaagctaagaatttgccttcgacggagcatgcccttcctctgaagttcacattt
gagttagagaaacccgagctggtggagaaatcagatattgataaaatcacagatgatttg
tttgctgagatgcaatttgctatcaggtccgaggaaatgggttcctctcctcgcacgggt
gacggtgctggcccagaagctgaaagaaaccaaaccactcctttctgtcatgggaagcat
aattttatccttgacgaggagattgggataaagtgcagttattgttctattgtggagctt
gagatcaaatatgtaacaccatcgtttggtgaatatttatttgctcgtgaaacatcaaac
aatgaatatgtttctgccagcaaagacttctctatgtttgatgggtttaaatttgaaggt
tcaaaggcttgtctacaggatccttgcaatcatgccgaaggaacagtttgggatgtcttg
cctggaaaaaaagagagcatgtatcctcaccaaatagaaggttatgagttcttatggagg
aatttagcgggaaccactcgtctcagtgaattgggaaaggccgatgcaagtagagtaggg
ggctgcatgatttcacatgcccctggaaccgggaaaacccggttaaccatagttttcatt
gagacatttctgactttatttccaaactgtctcccagtcgttgttgctcctgctggcatg
ttgttgacttgggaagaggagttcaggaaatggaaggtacaatttcctttccataacctg
aacaatccagaagtctcgggccaggaaaatgcaacctccactggattactgtccaaaagc
gtgtttcagagcaaaaatgcgctgcgcatggtaaagttacattcttggagcaaaggaaaa
agcgtgcttggaattagttatactttgtacgagaagctggctggtacaaaatatgtgcaa
gctgaaggtaaaaataagagaaagaagcttactcgtgggaaggaagatgaactgctaaga
aagattttgctggagttgcccggcttggtaattcttgatgaaggacacacgccacgcaat
caacggagtgggatttggaaaactctcttacaacttcaaacaaaaaggcggatcatcctt
tcaggcacccctttccaaaacaattttgaggagctcttcaatacactacatctagtaaga
ccagcagttgcagacatgatttcatcaggaggtaggagatattacagaaagcaactgaga
gggaaaagggcttttgtgtatggttcaagtgggaaagaagttgatacaattgagaagctt
aaagctacaatatctccatttgttcatgttcacaaaggtagcattcttcagcaaagtctt
tccgggttgagagattgtgcagttcttctatatccgtcccaactacagatggaaattatt
aaaactttacaaccttctgccaacactttcgagtttgagcacaaggtggcattggtttct
gtgcacccatctttgctcttacagtgtaaagaaacatctgtcagtgatccgaatgtgcta
gagcagcataggcttgacccttatcaaggtgtgaagacaaggtttattatggaactaatt
cgcctgtgtgtggctacaaaagaaaaggtccttatatttagtcagtatattgaccctttg
gagttaatcaaggaccagctgaaatcaattttcaattggcacgagggaagggaagttctc
caaatgcatggcacactagaacagagatgccggcaaaagtttattggcattttcaatgac
tccgggagtgaagctaaagtaatgctggcatcaataaaatgctgttcagaaggaataagc
ttaattggagcttcaagagttgttctgatagacgttgtttggaatccatccgtggagagg
caagccataagcagggcttatagactcggtcaagagaaggtcgtttatacatataatctt
atggcatctgggacaacagagggggagaaatactgtagacaagttgagaagaaccgtcta
tctgagttgtttttctcctctggtagcaaggaaagagaagaaaagaatcgtgctacaacc
ttcaacgatgtcattttggaggagatggttgcgcatggaaagctcaaagatatgtttgag
aggatcatttaccagccaaaacagacgaatttagtcgaaaaaatctctatccctcacccc
ataccaggatcctcttag
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