Diospyros lotus (date-plum): 127802582
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Entry
127802582 CDS
T10632
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03013
Nucleocytoplasmic transport
dlt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127802582
03015 mRNA surveillance pathway
127802582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127802582
03036 Chromosome and associated proteins [BR:
dlt03036
]
127802582
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127802582
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
127802582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
127802582
NCBI-ProteinID:
XP_052194429
LinkDB
All DBs
Position
5:complement(14415621..14432801)
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AA seq
158 aa
AA seq
DB search
MAGVEAPRRQGRLLPPARGGPPGPPALQAKVAPRFEPVDREKTCPLLLRVFTKIGGHHTD
TDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRDAVLSFAFVYPDKHGRFVV
KEVGRTYSYPNGRRPDSGGKALAELSFQIGDYLDVAIL
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagtggaagcgccaagaagacaagggaggctacttcctccggcgagagggggt
ccgcctgggccgccagcactccaggccaaggtggcccctcgcttcgaacctgttgatcgc
gagaagacttgtcctttattgcttcgagttttcacaaagattggaggtcatcatactgat
acagactttgcagtaaggggcaaggagcctaaagatgaggtccaaatttatacatggaaa
gatgctactctccgtgaattaactgatctggttaaagaggtagcaccagaagcaagaaga
agggatgctgtgctgtcctttgcttttgtatatcctgataaacatggccgttttgtggtt
aaagaggtgggaagaacctattcttacccaaatggtagacgacctgacagtggtggcaag
gcgttggctgaactcagcttccagattggagattacttggatgttgcaatcctgtag
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integrated database retrieval system
