Diospyros lotus (date-plum): 127803168
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Entry
127803168 CDS
T10632
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
127803168
Enzymes [BR:
dlt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
127803168
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
127803168
NCBI-ProteinID:
XP_052195181
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Position
6:15125430..15131745
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AA seq
668 aa
AA seq
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MEKAGWKKKQWLFLCFVTLAFLACRFRIASAVSHDGKASPPARLHKLSDDYVVMDNGLVQ
VTLSTPDGKVTRIQYDGIENLLENNKESNRGYWDIVWSGQEGDGLIDHLEGTRYKIIAAD
ENQIEISFLSTWNSSRHSHGRPLNVDKRFIMLRGSSGFYTYAIFERLEGWPAMTLVQARV
AFKLQHKLFNYMAISDTRQRFMPSVYDRINGKELDYKEAVLLTDPHNQTFKGEVDDKYQY
SADIKDNRLHGWISYNEGVGFWVITPNNEFRVGGPLKQELSSHVGPTSLAMFFSGHYAGP
PVSLSFQDGESWKKVLGPVFIYINKASNPDHLGSTLWEDAKQQMLNETQSWPYSFPLSAD
YAHADQRAVITGRLLVRDRYINKELMNASSAYVGLAKPGQVRSWQTESKDYQFWTQADAE
GHFVIKDVREGTYNLYAWVPGILGDYRYGVLVNATPGSHIRLGDLVYHPPRRGPTLWEIG
IPDRTSAEFYIPEPDPDYINRLYTKSQKFRQYGLWDRYTDLHPDGDLVYTIGKSNYQKDW
FFAHVTRRRKDNVYVPTTWRIVFKLWRVRSGSYTLHIALAASSFAELQLRINDQSRLRPH
FTTRLIGRDNAIARHGIHGLYSLYSVEVPSYLLVGGNNTIYLTQSRGGSPFSGLMYDYIR
FEGPPQTN
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggctgggtggaagaagaagcaatggcttttcctttgctttgttactctcgca
ttcttggcctgcagattcagaattgcgagcgccgtcagccacgacgggaaggcgtctccg
ccggcccggttgcataaattatcggatgactatgtggtgatggacaatgggcttgttcaa
gtcactttgtcgacgccggacggaaaggttacgagaatacagtacgatggaatcgagaac
ttgctggagaacaacaaagagtcaaatcgagggtattgggacatcgtatggagcggacaa
gaaggagatggcttaattgaccacctcgaaggaacaaggtataagatcatcgcagccgac
gaaaatcaaatagagatttcgttcctgagcacctggaattcttcccgccatagccatggc
cgcccattaaatgtcgacaagaggtttataatgctgcgtggttcatccggtttttatacc
tacgcgatatttgagaggctagagggatggcctgcaatgacccttgttcaagccagggtt
gctttcaagcttcaacacaaactgtttaactatatggcgatatcggatacaaggcagagg
ttcatgccatccgtatatgaccggatcaacggcaaggagctggactacaaagaagctgtc
ctgctgacggacccacacaaccaaactttcaaaggagaggtggacgacaagtaccaatac
tcggctgatatcaaggacaaccggttacacgggtggataagctacaatgaaggcgttgga
ttttgggtcattacacccaataatgagttccgtgttggtgggcctctcaagcaggagcta
tcttctcacgttggcccaactagcttggcgatgttcttcagcggccattatgctgggcct
cctgtgagcctgagtttccaagatggggagtcctggaagaaggttctcgggccggttttc
atctatattaacaaggcctccaaccctgatcatctaggtagcacactttgggaagacgcc
aagcagcagatgctgaacgaaacccaaagctggccatacagtttcccactttcagcggac
tatgcacatgctgatcaacgagctgtaatcaccggcagattactagtccgtgataggtac
ataaacaaggagcttatgaacgcaagttcagcttatgtggggttggccaagccggggcaa
gtgagatcttggcaaacagaaagcaaggattatcagttttggacacaagctgatgctgag
ggacactttgtgatcaaggatgtgcgagaagggacttacaacttgtatgcatgggtcccc
ggcattcttggagattacagatatggcgttctagttaatgccaccccaggaagccatatc
aggctgggtgaccttgtgtaccatccaccaagaagaggtccaaccttgtgggaaataggc
atccctgaccgcacttctgccgaattctatattcccgagccagacccggattacatcaac
cgtttatacaccaagagtcaaaagtttaggcaatatggtctgtgggaccggtacaccgat
ctccatcctgacggcgatctagtctacaccatcggcaaaagcaattatcaaaaagactgg
ttcttcgctcatgttaccaggaggagaaaagataacgtttacgtgccaaccacatggaga
attgtattcaaactgtggagagtgagaagtgggagctataccctccacatagcgctggct
gcaagcagctttgctgaattgcaacttcgaataaacgaccagtctcgactccggcctcac
ttcaccacgaggctcatcgggcgcgacaacgccattgcgcggcacgggattcatggtctg
tattcattgtacagcgtggaggtgcctagttatctgcttgtgggcggaaataatacaatt
tacttgacgcaatcaagaggcgggagccccttctcagggctcatgtacgattacatccgg
ttcgaaggccccccgcaaacaaactga
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