Diospyros lotus (date-plum): 127803459
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Entry
127803459 CDS
T10632
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04144
Endocytosis
Brite
Membrane trafficking [BR:
dlt04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
127803459
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127803459
NCBI-ProteinID:
XP_052195655
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Position
6:complement(11345770..11367317)
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AA seq
790 aa
AA seq
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MIPDGVEDEEKWLAAGITGLQQNAFYMHRALDSNNVKDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQNPVRGLFLRSYLSQISRDKLPDIGSEYEGDADTVVDAVEFVL
QNFTEMNKLWVRMQHQGPAREKERREKERSELRDLVGKNLHVLSQIEGVDLDMYRDTVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLEILLGACPQLQPSVDIKTVLSRLME
RLSNYAASSVEVLPEFLQVEAFAKLNSAIGKVIEAQVDMPIAGAVTLYSSLLTFTLHVHP
DRLDYVDQILGACVKKLSGKGKLDDSKATKQIVALLSAPLEKYNDIETALKLTNYPHVME
HLDNGTNKVMAGVIIQSIIKSRICISTAEKVGALFELVKGLIKDLDENLHDELDEEDFNE
EQNSVARLIQMLYNDDPEEMLKIICTVRKHILTGGPKRLPFTIPPLVFNSLKLVRRLQGQ
QENAAAEEVAPTPKKIFQLLNQTIEALSTVPVPELALRLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWIDDNDSVKDGERVLLCLKRALRIANAAQQMANATRGSSGSVMLFIEILN
KYLYFFEKGNPEINVSAIQGLIELITTEMQSDSITPDPAADAFFASTLRYIQFQKQKGGA
MGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgacggagtcgaagacgaagagaaatggctcgccgccggcatcaccggactt
cagcagaacgccttctacatgcatcgcgcacttgactccaacaatgtcaaggacgccctc
aagtactccgcccagatgctctccgagcttcgcacctcgcggctttcccctcacaaatac
tacgagctctacatgcgagcgtttgatgagttgaggaagctggaaatgttttttgaggag
gagacgaggcgtggttgctccattatcgatctgtacgagcttgtgcagcacgccggtaac
atattgcccagattgtatcttctttgtactgtgggatctgtgtatatcaaatccaaggaa
gctcctgcaaaggatgtccttaaggatcttgtagaaatgtgccgtggcatacaaaatcct
gtacgtgggctttttctgaggagttatctttctcagatcagtagggataagttgccagat
atcggttcagaatatgaaggggatgctgacactgtggttgacgctgtagaatttgtactt
caaaacttcacagagatgaacaagctttgggtgcggatgcaacatcagggacctgctcgg
gagaaggaaagacgagaaaaagaaaggagcgagcttcgtgatcttgtcgggaagaacctc
catgtcctcagccagattgagggtgttgaccttgatatgtacagagataccgtgcttccc
agagtcttggagcaggttgtcaactgtaaagatgagcttgcacaatactatttgatggat
tgcatcattcaagtctttccagatgagtaccacttgcagactcttgagatattgttaggt
gcttgcccccagcttcagccatctgttgatatcaagacagtgctttcacggttaatggaa
cggctgtcaaattatgctgcttcaagtgttgaagtcttacctgaattcttacaagtagaa
gcgtttgcaaaactgaacagtgccatagggaaggtgattgaggcacaggttgacatgccg
atagctggcgctgtgactctatattcttccctccttacatttactcttcatgttcatcct
gacaggcttgattatgtagatcaaatattgggagcatgtgtaaagaaactctctgggaaa
ggaaagctggatgatagcaaagcaacaaagcagattgttgctcttctgagtgctcccttg
gagaaatataatgatattgagactgccctgaagcttacaaactacccccatgtaatggag
caccttgacaatggaacaaataaagtcatggctggtgttatcattcaaagcatcatcaaa
agcaggatttgtatttctacagctgaaaaggttggggcattgtttgaattagtaaaaggc
cttatcaaggatttggatgagaatcttcacgatgagcttgatgaggaggattttaatgag
gagcaaaattctgttgcacgtctcattcagatgctgtataatgatgatccagaagagatg
ctaaagatcatatgtactgtaaggaaacatatcctgactggagggcctaagaggcttccc
ttcactatccctccccttgtctttaattctcttaagttggttagacgactacaagggcag
caggagaatgctgctgctgaagaggtagcccctacgccaaagaaaattttccagcttctg
aatcagacaattgaagctttatcaactgtaccagtacctgaactggcattgaggttgtac
ttgcaatgtgctgaggctgcaaatgactgcgatctagaacctgttgcttatgaatttttc
acccaagcatatatactatatgaagaagaaatttcggactccagagcacaggtgactgcg
atacatctgattatagggactcttcagaggatgcacgtctttggtgttgagaacagggat
acattgacacacaaagccacggggtattctgcaaagcttttgaagaagcctgatcaatgt
agagcagtttacgcatgttcacatctcttttggattgatgacaatgacagcgtcaaggat
ggagagagggtattgctttgcttaaagcgtgctcttagaattgctaatgctgctcaacaa
atggccaatgcaacacggggtagcagtggatcagtcatgctcttcattgaaatactaaac
aagtatctgtacttctttgaaaaggggaacccagagataaatgtttctgcgatccagggt
ttgattgaattaattacaaccgaaatgcagagtgacagtataacaccagacccagctgca
gatgctttcttcgcgagtacattgcggtacatccagttccagaagcagaaaggtggtgca
atgggcgagaaatacgaacccattaaggtgtga
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