KEGG   Diospyros lotus (date-plum): 127803531
Entry
127803531         CDS       T10632                                 
Name
(RefSeq) THO complex subunit 4D isoform X1
  KO
K12881  THO complex subunit 4
Organism
dlt  Diospyros lotus (date-plum)
Pathway
dlt03013  Nucleocytoplasmic transport
dlt03015  mRNA surveillance pathway
dlt03040  Spliceosome
Brite
Messenger RNA biogenesis [BR:dlt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127803531
    TREX complex
     127803531
Spliceosome [BR:dlt03041]
 Complex C
  Other components
   EJC/TREX
    127803531
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127803531
SSDB
Motif
Pfam: RRM_1 RRM_9 TrAA12
Other DBs
NCBI-GeneID: 127803531
NCBI-ProteinID: XP_052195765
LinkDB
Position
6:complement(14726976..14744292)
AA seq 300 aa
MASLDASLDDMIRYRRNSERGRGRGMAWRGRGRGGSFSGRRMTGAPRRGPFGLNARPSSY
AIAKSFRRTTNFPWQRDLVEDSLRAVGVSGTENGTKLYISNLDVGVSNEDIRELFAEIGD
LKRFAVHYDKTGRSSGSAEVVFVRRSDAFQALRRYNNVQLDGKPMKIEIIGTNSDIPVSA
RVNVVGGVNGRRTVVMMPGGRGRGGSATANRGSGQRSRGGLRNGRGRGQGQGRGRGWSRG
QGQGRAVGRRGPLRSRRMNLTKNWRVIILMLCKHEELSSSARQTDVGYKVAILAAKKFRM
NT seq 903 nt   +upstreamnt  +downstreamnt
atggcttctttggatgcatcacttgatgacatgataaggtacaggcgcaatagtgagaga
ggtagaggacgaggaatggcttggcgtggtcgagggcgaggagggtcattcagtggcaga
agaatgacaggggcacctcgcagaggtccatttgggttgaatgctcggccatcatcttat
gccattgccaagtctttccgcagaacgacgaattttccttggcagcgtgatctggtcgaa
gacagtcttagagctgtaggagtatcaggcacagaaaatggaacgaagttatacatttca
aacttggatgttggagtgagcaatgaagatataagggaactgttcgctgagattggagac
ctaaaacgatttgcagttcattatgataaaactggacgttcaagtggttctgctgaggta
gtttttgtccgaagaagtgatgcattccaagcacttaggcggtacaacaatgtacaattg
gatggaaagcctatgaagattgaaataataggcacaaactcagatattcctgtttctgct
cgtgtcaatgtggttggtggtgtaaatgggaggagaacagtcgttatgatgccaggaggt
cgtggcagaggtggctctgctacagctaatcgtggttctggtcagaggagccgtgggggc
ttgaggaatggccgtggccgcggccagggccagggcaggggcaggggctggagccggggc
cagggccagggccgggccgtgggaagaagaggaccgttgagaagtcggcggatgaacttg
acaaagaactggagagttatcatactgatgctatgcaaacatgaagaactatccagctct
gcccgacagacagatgttggatataaggttgcaatattagctgctaaaaaatttagaatg
tga

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