Diospyros lotus (date-plum): 127803531
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Entry
127803531 CDS
T10632
Name
(RefSeq) THO complex subunit 4D isoform X1
KO
K12881
THO complex subunit 4
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03013
Nucleocytoplasmic transport
dlt03015
mRNA surveillance pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127803531
09122 Translation
03013 Nucleocytoplasmic transport
127803531
03015 mRNA surveillance pathway
127803531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127803531
03041 Spliceosome [BR:
dlt03041
]
127803531
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127803531
TREX complex
127803531
Spliceosome [BR:
dlt03041
]
Complex C
Other components
EJC/TREX
127803531
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127803531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_9
TrAA12
Motif
Other DBs
NCBI-GeneID:
127803531
NCBI-ProteinID:
XP_052195765
LinkDB
All DBs
Position
6:complement(14726976..14744292)
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AA seq
300 aa
AA seq
DB search
MASLDASLDDMIRYRRNSERGRGRGMAWRGRGRGGSFSGRRMTGAPRRGPFGLNARPSSY
AIAKSFRRTTNFPWQRDLVEDSLRAVGVSGTENGTKLYISNLDVGVSNEDIRELFAEIGD
LKRFAVHYDKTGRSSGSAEVVFVRRSDAFQALRRYNNVQLDGKPMKIEIIGTNSDIPVSA
RVNVVGGVNGRRTVVMMPGGRGRGGSATANRGSGQRSRGGLRNGRGRGQGQGRGRGWSRG
QGQGRAVGRRGPLRSRRMNLTKNWRVIILMLCKHEELSSSARQTDVGYKVAILAAKKFRM
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttggatgcatcacttgatgacatgataaggtacaggcgcaatagtgagaga
ggtagaggacgaggaatggcttggcgtggtcgagggcgaggagggtcattcagtggcaga
agaatgacaggggcacctcgcagaggtccatttgggttgaatgctcggccatcatcttat
gccattgccaagtctttccgcagaacgacgaattttccttggcagcgtgatctggtcgaa
gacagtcttagagctgtaggagtatcaggcacagaaaatggaacgaagttatacatttca
aacttggatgttggagtgagcaatgaagatataagggaactgttcgctgagattggagac
ctaaaacgatttgcagttcattatgataaaactggacgttcaagtggttctgctgaggta
gtttttgtccgaagaagtgatgcattccaagcacttaggcggtacaacaatgtacaattg
gatggaaagcctatgaagattgaaataataggcacaaactcagatattcctgtttctgct
cgtgtcaatgtggttggtggtgtaaatgggaggagaacagtcgttatgatgccaggaggt
cgtggcagaggtggctctgctacagctaatcgtggttctggtcagaggagccgtgggggc
ttgaggaatggccgtggccgcggccagggccagggcaggggcaggggctggagccggggc
cagggccagggccgggccgtgggaagaagaggaccgttgagaagtcggcggatgaacttg
acaaagaactggagagttatcatactgatgctatgcaaacatgaagaactatccagctct
gcccgacagacagatgttggatataaggttgcaatattagctgctaaaaaatttagaatg
tga
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