Diospyros lotus (date-plum): 127803918 Help Entry 127803918         CDS       T10632                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism dlt  Diospyros lotus (date-plum) Pathway dlt04142   Lysosome biogenesis dlt04145   Phagocytosis dlt04148   Efferocytosis Brite KEGG Orthology (KO) [BR:dlt00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     127803918    04142 Lysosome biogenesis     127803918    04148 Efferocytosis     127803918  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dlt04131]     127803918 Membrane trafficking [BR:dlt04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     127803918 SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_Vps41 zf-HC5HC2H_2 AlaDh_PNT_N TPR_WDR35 Motif Other DBs NCBI-GeneID:  127803918 NCBI-ProteinID:  XP_052196516 LinkDB All DBs Position 6:9432052..9453589 Genome browser AA seq 1007 aa AA seqDB search MVHSAYDSFVLLSNCPTKIDAVESYGSKLLLGCSDGSLRIYAPESSGSDHSPTSDRRAQT LELRKEPYVLERTINGFSKRSMVAMEVLASRELLLSLSESIAFHRLPGLETIAVITKAKG ANVYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDTVKSMSWCGENICLGIRR EYTILNSTNGALSEVFPSGRIAPPLVVSLPSGELLLGKDNIGVFVDQNGKLLQEGRICWS EAPTTVAIQKPYAIGLLPRHVEIRSLRVPYPLIQTVVLRNVRHLLESSYAIIVALENSVY GLFPVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRAAKEQSIHIRYAHYLFENGSYE EAMEHFVASQVEITHVLSLYPSIVLPKSAVLPEPDKLMDITGDAPHLSRGSSGLSDDMES PSPSQLIETSENAALESKKMSHNTLMALIKYLQKKRYGIIEKAAAEGTEEVVSDAVGDNY VSFDSNWSKKSTKGRVNITISSAAREMAAILDTALLQALLLTGQSSAAVELLKGLNYCDI KICEEFLQKRNQYIALLELYKCNAMHREALNLLHKLIEESKSEQPQVELTQKFKPEMIID YLKPLCGTDPMLVLEFSMHVLESCPTQTIELFLSGNIPADLVNSYLKQHAPNMQATYLEL MLAMNENGISGNLQNEMVQIYLSEVLEWHVDLSAQQKWDEKTYSPTRKKLLSALESISGY NTEALLKRLPADDLFEERAILLGKMNQHELALSIYVHKLHVPDLALSYCDRVYESALQHS AKSYSNIYLTLLQIYLNPQKTTKNFEKRITNLVSTPTSGIPRVASGSSTKMKGSRSSRKI AEIEGAVEVRISPSSTDSGRSDGDADDPNEEAGSSIMLDEVFDLLSRRWDRINGGQALKL LPRGTKLQNLLPFLGPLIRKSSEAYRNFSVIKSLRESENLQVKDELYTQRKTVVKITSDS MCSLCNKKIGTSVFAVYPNSNTLVHFVCFKDSQSMKAVYKGALGRKR NT seq 3024 nt NT seq  +upstreamnt  +downstreamnt atggtacacagtgcatacgattcattcgtcctcctcagtaattgcccgacgaagattgac gccgttgagtcctacggctccaaactactcctcggttgttctgatgggtctcttcggatc tacgccccggaatcatcgggctccgaccactctccgacttcggatcggcgtgctcaaacc ctagagctgcgaaaggagccctatgtcctcgaacgaaccatcaatggcttctcaaagagg tcgatggtggcaatggaggttttggcctcgagagagctactcctttcgctgtctgaatcg atcgcgtttcaccgccttcccggtttggagactattgcggtgattaccaaagccaaaggc gcgaatgtgtattcctgggacgaccggagagggttcctgtgcttcgccaggcaaaagagg gtctgcattttcagacacgacggaggacggggatttgtggaggtgaaggaatttggggta ccagatacggttaagtcaatgtcttggtgtggtgagaatatatgtttggggattagacgg gaatacacaatactgaattccacaaatggtgcattatctgaggtatttccttctggtagg attgcccctccactagtagtgtctcttccatctggagaacttcttctggggaaggataac attggagtgtttgtggatcaaaatgggaaacttcttcaagaaggcaggatttgttggtct gaggctccaacaaccgttgccatccagaaaccatatgctataggtctcttaccaagacat gttgagatacgctctctccgagttccttatccattaatacagactgttgtcctccgcaat gttcggcatcttttggaaagctcttatgcaataattgttgcattagagaactctgtttat gggctgtttcctgttcctcttggtgcccagatagtacagttaacagcatctggcaatttt gaggaagctctggctttatgtaagctgcttccaccagaggactcaagcctacgagcagca aaggagcaatcaattcatataagatatgcacactatctgtttgagaatggaagctatgag gaagccatggaacattttgtagcatctcaagtagaaatcacacatgtgctttctttatac ccatctattgtacttccaaaatcagctgtgttacctgaaccagataagttaatggacata actggagatgctccacatctctcaagaggttcatctggtttatcagacgatatggaatca ccatccccttcgcagctaatcgaaaccagtgagaatgctgcacttgagtccaagaagatg agccacaacacattaatggctctcataaagtatttgcagaagaagagatatggcataatt gagaaagctgctgctgagggaactgaggaggttgtttcagatgctgttggagataattat gtgtcttttgattccaactggtcaaagaaatcaaccaagggccgtgttaacattaccatt agctcagctgctagggagatggcagcaatactggatacagcactactccaagctcttctt ttaactggacaatcttcagctgcagttgaactactgaaaggtctcaactactgtgatata aaaatatgtgaggagtttcttcagaaaaggaatcaatacatcgctttgcttgaactttac aagtgcaatgctatgcaccgtgaagccctcaatcttctgcataaattaattgaggagtca aagtcagaacaacctcaagtagagctcacacagaagttcaagcctgagatgattattgac tatctcaaacctctctgcgggaccgatcctatgcttgtattggagttttcaatgcacgtc ctcgaaagttgtccgacacaaaccattgagctctttttgtctggaaatattccagcagat ttggttaactcttacttaaagcagcatgcacccaatatgcaggccacatatttagaactg atgcttgcaatgaatgaaaatgggatatctggaaatctgcagaatgaaatggtgcaaatc tatctttccgaagtgcttgaatggcatgtagatctaagtgctcaacagaaatgggacgaa aaaacgtattccccaacaaggaagaaattattgtccgctttagagagcatctcaggatat aatacagaggctctattaaagcgacttccggcggatgatttatttgaagagcgtgcaatt ttgttgggaaaaatgaaccaacatgagcttgcattatcaatatatgttcataagcttcat gttcctgatctagcattgtcctactgtgatcgtgtttatgagtctgcactccaacattct gcaaaatcatatagcaatatctacctcactctcttgcaaatatatttgaatcctcaaaag acgacaaaaaactttgaaaagcgaatcaccaatctggtatcaactcccacttctggtatt ccgagagttgcttcaggaagttcaactaaaatgaaaggaagtcgctcatccaggaaaatt gcggagatagaaggtgcagtagaagtccgaatcagtcccagcagtactgacagtgggagg agtgatggtgatgcagatgatcccaacgaggaagcaggttccagtattatgttggatgag gtctttgatctgttgagccgaaggtgggacagaatcaatggtggacaggcattaaaacta ttacccaggggcactaagttacagaacttgcttccctttcttgggccccttatcagaaaa tccagtgaagcataccggaacttttctgttatcaagagtttgcgtgagagtgagaacctg caggtaaaagatgaactttatacccaaaggaaaacagtagtgaagattaccagtgatagc atgtgctccctctgcaacaagaagatagggactagtgtctttgcagtctatcccaacagt aatactcttgtacacttcgtttgctttaaggactcgcagagcatgaaggctgtttacaaa ggcgcacttgggaggaagcgatga

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