Diospyros lotus (date-plum): 127804089
Help
Entry
127804089 CDS
T10632
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt00040
Pentose and glucuronate interconversions
dlt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127804089
Enzymes [BR:
dlt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
127804089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
127804089
NCBI-ProteinID:
XP_052196775
LinkDB
All DBs
Position
6:1225714..1227528
Genome browser
AA seq
409 aa
AA seq
DB search
MAMSTTTLALSFLFSTLLLQAPPLVFPFPAVQDPDLVVQEVHTRINASRRNLGYLSCGTG
NPIDDCWRCDPNWESNRQRLADCAIGFGKNAMGGKNGRIYVVTDSSDDDPVNLRPGTLRH
AVIQDEPLWIVFKRDMVIQLKEELLVNSFKTIDGRGASVHIAGGPCITIHYKSNIIIHGI
HIHDCKPGRGAIIRDSPEHAGHWLVSDGDGVSIFGGTHIWVDHCSLSNCQDGLIDAIHGS
NAITISNNFLTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN
NDYTHWEMYAIGGSANPTINSQGNRFLASNLAVRKEVTKHEDAPESEWKNWNWRSEGDLM
LNGAYFRQSGAGASSPYARASSLSARPSSLVGSMTATAGALGCRKGSHC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtctaccaccactcttgctctctctttccttttctctactctcttacttcaa
gctccacccctagttttcccctttccggcggttcaagaccccgatctcgtcgtacaagaa
gttcatacgagaatcaatgcgtcgaggaggaacctgggatacttgtcttgtggcaccggc
aacccaattgacgattgctggcggtgcgatccgaattgggagagcaaccggcagcggctg
gcggattgcgccattgggttcgggaagaacgcgatgggcggcaagaacggcaggatttac
gtggtcaccgactccagcgacgacgacccggtgaacctcaggcccggaactctccggcac
gcggtgatccaggacgagcctctgtggatcgtcttcaagcgggacatggtgatccagctc
aaggaggagctgctggtgaactcgttcaagaccatcgacggccgaggggctagcgtccac
atcgccggcgggccgtgcatcacaatccattacaagagcaacatcatcatccacggcatc
cacattcatgactgtaagcccggcaggggcgccattatacgggactcgccggagcatgcc
gggcattggctagtgtcggacggcgacggggtgtcgatcttcggcgggacgcatatctgg
gttgaccactgctcgctgtcgaattgccaggacgggctgattgacgccatccatggatcc
aacgccatcaccatctccaacaatttcttgactcatcatgacaaggtcatgctgttgggc
cacagcgattcatacactcaggataaggacatgcaggtcaccattgctttcaatcatttt
ggtgaaggcctggtgcaaaggatgcctaggtgcagacatgggtacttccatgtggtgaac
aatgactacactcattgggaaatgtacgccattggtgggagtgcaaacccaaccatcaac
agccaaggcaatagatttctggcatccaacctagcagtcaggaaagaggtgacaaaacac
gaggatgcgccggaaagtgaatggaaaaactggaactggcggtcggaaggagacttgatg
ctgaacggcgcctacttcaggcagtcgggggccggtgcgtcatccccttatgctagggcg
tccagcttgagcgctcgaccatcttcgcttgtgggttcgatgactgcaactgcgggtgcg
cttggctgccggaagggctctcactgctga
DBGET
integrated database retrieval system
