Diospyros lotus (date-plum): 127804120
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Entry
127804120 CDS
T10632
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03440
Homologous recombination
dlt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127804120
03460 Fanconi anemia pathway
127804120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlt03032
]
127804120
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127804120
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127804120
DNA replication proteins [BR:
dlt03032
]
Eukaryotic type
DNA Topoisomerases
127804120
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127804120
FA (Fanconi anemia) pathway
127804120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
127804120
NCBI-ProteinID:
XP_052196823
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All DBs
Position
6:complement(37005641..37125141)
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AA seq
926 aa
AA seq
DB search
MSGGGQTIWALNVAEKPSVAKAVAGILSKSQGGMRRVREGRSRFNKIFEFSYNIRGQQCH
MLFTSVTGHLMELDFEDRYRKWHSCDPADLYHAPVRKYVPDDKLDIKRTLEEESRKCQWL
VLWLDCDREGENIAFEVVQVCTAANPRLNVWRARFSALIEREIRESVQTLGRPNQLFADA
VDARQEIDLRIGASFTRFQTMLLRDAFNLDFAPDERNVVLSYGPCQFPTLGFVVERYWEI
QSHEPEEFWTINCTHNSDEGTAAFSWMRGHMFDHICTVIIYEMCVQESTATVTKVRQQEK
LKYPPHPLSTIELEKRASRYFRMSSEQTMKVAEELYQTGFISYPRTETDCFSEKTDLRAI
VQEQQGHPVWGSYAQRLLDPGEGLWRNPSSGGHDDKAHPPIHPTNFSSGQSRWSQDHHRL
YELVVRHFLACVSKPAVGAETTVEIEIGGELFSASGRAILEKNYLDVYRFEAWGGSMIPR
YTFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLFDRFYATK
DSNTRFSPTNLGEALVMGYDDMGYELWKPYLRAAVENDMKAVSIGTKRKAEVLCTCLEQM
KACFLDARLNKAKLFEAMAVFFERSTRSGTNDQYTIQDVVRRCDVCQESDMVLRQKPDGN
FMVGCIGFPQCRNVVWLPGSTAEASVTTNHCRVCTPGPVFMIQFKFRRLEIPPNYNVDHL
GCIGGCDEILKQLVEICGTGSRNLSAIPARARGRTASVSRTQQSNSRQTACGHCGQYSHS
SNDCPSQPSHSFGSRHQGVNEQTGESSIPCDTCGAPCIMRTANTANNRGRKFYSCQSQGC
NFFVWVDSLSNNGGRRRGRASMSSGSASSSRLGGRGLGGGGHASDTTTTFVSAATGEPIN
PTSNRRRCYVCGDPSHFANACPNRGS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggtgggcagacgatatgggcactgaacgtggcggagaagccgtcggtggcg
aaggccgtggccggaatactgtcgaagagccaaggtgggatgaggcgggtgagggagggg
agatccaggttcaacaagatcttcgagttcagctacaatatcaggggccagcagtgccac
atgctcttcacgtcagtgacgggccacctcatggagctcgacttcgaagaccgctaccgt
aaatggcactcctgcgaccccgccgacctgtaccatgcccctgtccgcaaatacgttccc
gacgacaaattggatataaagagaacgctggaggaggaatcgagaaagtgccagtggctg
gtgctctggttggattgcgatagagaaggagaaaacattgcatttgaagttgtgcaagtt
tgtacggctgccaatcctcgtctcaatgtgtggagggctcgtttctccgccttaattgaa
agggaaatccgtgaatcagtgcagactctaggtcgacctaatcaattgtttgcggatgct
gtggatgctaggcaagaaatagatctccggattggtgcttcattcactagatttcagact
atgctgttgagagatgcatttaatcttgattttgctcctgatgagagaaatgttgttcta
agttatggtccttgtcagttccctacgctaggttttgttgtagaacgatattgggagatt
caatcacacgagcctgaagagttctggacaatcaactgcactcacaactcagatgaagga
actgctgccttcagttggatgcgtgggcatatgtttgatcatatttgtactgtaatcatc
tatgaaatgtgtgttcaagaatccactgcaactgtcacaaaagttagacaacaggagaaa
ctgaagtatcctcctcatcctctaagtactattgagcttgaaaaacgtgcatcacggtac
tttcggatgagttctgaacaaaccatgaaggtggcagaagagctttaccaaactggcttc
atcagttatccacgtacagagacggactgtttctcagagaaaactgatttgcgtgcaatt
gtgcaagaacaacagggacatcctgtttggggttcttatgcccagcgcctgttggatcct
ggagaaggactgtggagaaacccaagtagtggtggccatgatgacaaagctcatcctcca
atccatcctacaaatttttctagtggccagtctagatggagtcaggaccaccatagattg
tacgagttggttgttcgccatttcctggcctgtgtttccaaaccagctgtaggagctgaa
actacagttgaaattgaaattggtggtgaattattttctgcatctggtagagcaatactt
gagaaaaattacttggatgtctacagatttgaagcttggggaggttcaatgatcccaaga
tatacttttgggcaacagttcatcccaacaacattgactcttgattcaggtgttactaga
ccaccaccccttctaagtgaagctgatttgttaaattgcatggacaaggcaggaattggg
acagatgcaaccatgcatgaccacataaaaaagctttttgaccgattttatgcgaccaaa
gactccaatactcgtttctcccccaccaatcttggcgaggcactagttatgggatatgat
gacatgggctatgaactttggaaaccatatcttcgagctgcagtggagaatgacatgaaa
gcagttagcatagggacaaagagaaaagcagaggttttgtgcacatgcttggagcaaatg
aaagcttgcttcttagatgctaggttgaataaagcgaaattatttgaagccatggcagtt
ttttttgagagatctactagatcaggtacaaatgatcagtatacaattcaagatgtagtt
cgacgatgtgatgtttgccaagagtcagatatggtgcttaggcagaaaccggatgggaac
ttcatggttgggtgcataggtttcccacaatgtagaaatgttgtgtggcttcccggatca
acagctgaagcaagcgttaccactaaccactgccgcgtgtgtactccaggtcctgttttc
atgatccagtttaagtttcgccggctggagataccacccaactataatgtggaccattta
ggttgcattggtggctgtgatgaaattctgaagcaactggtagaaatttgtggaactggt
tcccgcaatctgtctgccataccagcaagagctcgaggacgcactgcatcagtcagcagg
acccaacagagtaattcaaggcagacagcttgcggccactgtgggcaatattcgcactct
tcaaatgattgcccttcacagccttcacattcatttgggtctcggcatcaaggagtgaat
gaacaaactggagaatcttcaattccttgtgatacgtgcggtgcgccatgcatcatgcgg
actgcaaatactgcaaataacaggggaagaaagttttactcctgtcaatcacagggctgc
aacttctttgtatgggtggatagcctaagcaacaatggaggaagaagacgtggtcgtgca
agtatgagcagcggctcggcatcgagttccagattgggcgggcggggactaggcggggga
ggccatgcgtctgacacgacgacgacctttgtgtcggcagcaacaggtgaacccattaat
cccacatcaaatagaaggcgttgttatgtatgtggggatccatcacactttgctaatgca
tgccctaatcgtggtagttag
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