Diospyros lotus (date-plum): 127804188
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Entry
127804188 CDS
T10632
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127804188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127804188
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127804188
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127804188
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF4729
zf-RING_UBOX
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
127804188
NCBI-ProteinID:
XP_052196947
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Position
6:5543526..5549251
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AA seq
357 aa
AA seq
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MAKFSVGRDEDDDNEGTSNPRPKRQKGNFSSLEATQERQARKHKLDLEEAVASDCEEEED
EEEEGEGGEEGEAESENAEEDGEEELGEERDDGQYDAERWNAERPSDDTYGSISVTLTDP
DVLDCPVCLEPLTAPVYQCENGHVACSSCCGMLKNKCPPCALPIGYNRCRAIEKVIESIK
ISCRYMKYGCRERVNYPKKHEHEETCIYAPCSCPLPDCNFIGSSKTLFAHFSRKHPTSAK
RFRYNCHIPITITPQQKYLLLQERSEGRLFILYKGTELIGYTLHVSCIGPTSSSKGFAYH
LVAGSGFPSVSLRAHTECSLGLVAGDPPLNKKFLLVPPDLLASPGLLNLNLYISNIL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttttcggtgggaagggatgaggatgacgataacgaagggactagcaatcca
aggcccaagaggcagaaggggaacttctccagtttggaagcgacacaagaaaggcaagct
cggaagcataaattggatctggaagaagcagtggcttccgattgcgaagaagaagaagac
gaagaagaagaaggtgagggaggggaagagggagaggcagaatctgagaatgccgaagaa
gatggggaagaagagctaggggaggaaagggatgacggtcagtacgatgccgagaggtgg
aatgctgagcggccatcggatgacacatacggatccatttccgtaaccctaaccgatccg
gatgtgctcgattgccctgtttgtctcgaacctttgacggctccagtctaccagtgtgag
aatgggcatgtggcatgctcctcctgctgcggcatgcttaagaacaagtgtcctccttgc
gctttgccaatcggctataatcgctgtcgggccattgagaaggttattgaatcaatcaaa
atatcatgccggtacatgaagtatggttgcagggaaagagtgaactaccctaagaaacac
gagcatgaggagacctgtatctacgcaccatgttcatgccctcttcctgattgcaacttc
attggatcttctaagaccttgtttgcacacttcagcaggaaacatccaacctctgcgaag
cgcttcaggtataactgtcacatcccaataaccataacaccacaacagaagtaccttctc
cttcaagaacgcagtgagggcagactttttattctctacaaggggactgaacttattgga
tacacactgcacgttagttgcatcgggccgacctcatcgagcaaaggttttgcataccat
ctcgtagccggttctggtttcccttccgtgagcctacgcgctcacacagagtgctcactg
gggctagtagcaggtgatcctcctctgaacaagaagtttcttctggttccgcctgatttg
ctggcttcccccgggctgcttaatttgaatctctacatatcgaacatcctgtaa
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