Diospyros lotus (date-plum): 127804595
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Entry
127804595 CDS
T10632
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127804595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127804595
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
127804595
Prokaryotic type
Archaeal type
TFB
127804595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
127804595
NCBI-ProteinID:
XP_052197429
LinkDB
All DBs
Position
6:9174462..9191198
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AA seq
532 aa
AA seq
DB search
MRCPYCSAAQGRCTTTAAGRYITECTSCGRVVEERQSQSHHLFHLRALDSPLCLVTSDLP
TLPIAATGEQFKDKDQEEEEEEEDPFEPTGFITAFSTWSLEPYPVFAQSSVSFAGHLAEL
ERVLETTSSSSSSSSGPSVVVDNLRAYLQIIDVSSILGLDYDISDHAFQLFRDCSSATCL
RNRSVEALATAALVQAIREAQEPRTLQEISLAANLPQKEIGKYIKILGEALQLSQPINSN
SITVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRK
TQAEICKVTGLTEVTLRKVYKELLENWDDLLPKNYTPAVPPEKAFPTTSIASGRSSTPRI
DTIDVTSLDKDKLLEIKPTNPNEFSDPFLQTGSKEEPDSKANIQIIHSVQVNPAPSFWQA
QHPFGASGIITGEKNIISQEMDMDPQPNNAQELEEADKDAKPAASSLKLGQFSTSMAPGT
SSIAWAVNLQLCLAHLHLLDLCSKIMEPGIKLNAILTGILVRFYFSSFCCCR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgcccgtactgctcggcggctcaggggcggtgcaccaccactgccgccgggcga
tacataacggagtgcacatcctgcggccgagtcgtggaggaacgccagtcccaatcccac
catctcttccacctccgagccctggactcgcctctctgcctcgtcacctccgacctcccc
accctccccatcgccgccaccggcgaacaattcaaagacaaagatcaagaagaagaagaa
gaagaagaagatccgttcgaacctaccggcttcatcaccgcattctcgacctggtcgctc
gaaccctaccctgtgttcgcccaatcttccgtatccttcgccggccacctcgcggagctc
gagcgcgtcctcgagaccacttcttcgtcctcctcgtcttcctctggtccgtccgtggtt
gtggataatctgagggcctatcttcagataatcgacgtgtcatcgattctcggattggac
tacgacatatcggaccatgcgtttcagctcttcagggactgttcctcggctacttgtttg
aggaatcgtagtgtcgaagcgcttgccactgctgctcttgtgcaggccattcgggaggcc
caggaacctagaaccctccaggaaatctcacttgctgccaatttgccccaaaaagagatt
gggaagtatatcaagatattaggagaagctttacaactaagtcagccaattaacagcaat
tccataacagtacatatgccaaggttttgcacgcttctccagctgaacaaatctgctcag
gagcttgctactcacattggagaagttgtgatcaataaatgcttctgcactaggagaaac
cccattagcatatcagcagctgctatttatttggcttgccaacttgaagacaaaagaaag
acccaggccgaaatttgtaaggtgactggactcactgaggtcactttacgcaaggtttac
aaggagctcctggagaattgggacgatctgctgccaaaaaattatactccagctgtccct
ccagagaaagcatttccaacaacctcaattgcctctggtcgttcttcaactcctaggatt
gacacaattgatgtaacttccttggacaaagacaagctgcttgaaattaagcctacaaac
ccaaatgaattttcagacccgtttcttcagacagggtccaaagaggaacctgacagcaaa
gccaatattcagataattcattcagtgcaggtgaatccggcgccaagtttttggcaggct
cagcatccgtttggggcttctggaataataacaggagagaaaaatatcatcagccaagaa
atggatatggatccacagcctaataatgctcaagagttggaggaggcagataaagatgca
aagcctgctgccagttctctgaagctgggccagttttcgacatccatggctccaggtaca
agttccattgcttgggcagtcaatctccagctttgtctagctcaccttcatctcttggac
ttgtgcagcaaaattatggagccaggaataaaactgaatgcgatcctcacggggatactt
gttagattttacttctcttctttctgttgttgtagatag
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