Diospyros lotus (date-plum): 127804671
Help
Entry
127804671 CDS
T10632
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127804671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127804671
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127804671
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127804671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
DZR
Motif
Other DBs
NCBI-GeneID:
127804671
NCBI-ProteinID:
XP_052197554
LinkDB
All DBs
Position
1:45137578..45155865
Genome browser
AA seq
318 aa
AA seq
DB search
MEIDRIECVSSSDGMEDEEVAASHHPNSHHFSSKSHNVVIPSGIAPATSVHELLECPVCT
NSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAEALELPCKYFSLG
CPEIFPYYSKLKHEAVCNFRPYNCPYAGSECSVTGDIPFLVTHLRDDHKVDMHTGFTFNH
RYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSY
SLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRI
WKEQQNPDGGVCIPNLCS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagatagatagaatcgagtgcgtatcgtcgtcggacgggatggaggacgaagaagtc
gccgcttctcaccatccaaacagtcatcatttctcctcaaagtctcacaatgtggtaatc
ccatctggaattgctcccgcaaccagcgtccacgaattgctcgaatgtcccgtttgcacc
aattctatgtaccctccaatccatcagtgtcacaacggacatacattgtgttccacctgt
aaaacgagagtacacaaccgctgcccgacttgcaggcaggagcttggagatattcggtgc
ctggcactggagaaagtagcagaagcgcttgaattgccctgcaagtatttttccttggga
tgccccgaaatatttccatattacagcaagctcaagcatgaggcagtgtgtaacttcaga
ccatacaactgcccgtatgctggttcagagtgctctgtaactggtgatatcccttttctg
gttacgcatctgagagatgaccataaggtggatatgcacacaggattcacattcaatcat
cgttatgtaaaatccaatccccgtgaagtagaaaatgctacttggatgctaacggttttc
cattgttttggccaatatttctgcctccactttgaagcatttcagcttggcatggctccc
gtgtacatggcattcctccgattcatgggtgacgaaaacgaagcccggaattacagctac
agcctggaggttggggcaaatggcaggaagcttatatgggagggcaccccgcggagcatc
cgggatagccaccggaaggtgagggacagccatgacggtctgatcatccagagaaacatg
gcactcttcttttctggtggggacaggaaagagctgaagctgagagtgacagggaggata
tggaaggagcagcagaacccggatggtggagtgtgcataccaaacctctgcagctga
DBGET
integrated database retrieval system
