Diospyros lotus (date-plum): 127804737
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Entry
127804737 CDS
T10632
Name
(RefSeq) probable polygalacturonase At1g80170 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt00040
Pentose and glucuronate interconversions
dlt01100
Metabolic pathways
Module
dlt_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127804737
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
127804737
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
127804737
NCBI-ProteinID:
XP_052197662
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Position
6:3086499..3089166
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AA seq
411 aa
AA seq
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MAKFLLILFASSLSALSVQCHLRHDKAFNVLDFGATGDGSTDDTRAFEDAWESTCSVRDS
SPTMHIPRGYIFLLQPVVFYGPCKSNLVKIVIDGTLVAPWDPSKWKCRGKKCHQWIGFSQ
LDGLYISGSGTINGQGAEWWRSRCKHEEKASLSTNLSCPTKPTGLVISNSNNLHINGLTF
LDSPQMHIAIERSRWIHASALTIMAPRDSPNTDGIHTQHSQNVFINHAHIQTGDDCISIG
DGSAHVHISRIKCGPGHGISIGSLGENGKYETVEHVHVSHVEFRNTSNGARIKTWQGGKG
FARNIVFKQIKCYGVGQPIIIDQYYCDHERCRNQTSAVEVSNVRYSGIEGTSKEETAVRF
ACSESVPCKDILLSDVNLGSSQGQTETTSLCLNVQGRQRGDISPSVPCLSH
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttctcctgatcttattcgcttccagtctctccgcactctcagttcagtgt
caccttagacacgacaaagcctttaacgtgttagatttcggagcaaccggagatggttca
actgacgataccagggcattcgaagatgcatgggaatctacgtgctcggtgagggatagt
tctccaaccatgcatattccccgtggctatattttcttgctacaaccagtggtcttctat
ggcccttgcaaatctaacttagtcaaaattgtgatagatgggacgctagttgctccctgg
gatccctcaaaatggaaatgcagaggaaagaagtgccatcaatggattggcttttctcaa
ctggatggcctctacatatcagggtcgggtaccatcaacggccagggagcagaatggtgg
cgctcccgttgcaagcatgaagagaaggcaagcctatctaccaatctgagctgtccaacg
aaacccactgggcttgtaatatcaaactccaacaacttgcatatcaatggcctaaccttt
ctggacagccctcagatgcacattgccatcgaaaggtcgagatggatacatgcttctgct
ctcaccatcatggcccctcgggatagtccaaacacggatggaattcacactcaacattcc
caaaacgtcttcataaaccacgctcacatccaaaccggtgatgactgtatttctatagga
gatgggtctgcacatgtccatattagcaggatcaaatgcggaccagggcatggcataagt
attggaagtttaggcgagaacgggaaatacgagacagtagagcatgtccacgtaagccat
gtcgagttccgaaatacatccaatggagcaagaataaagacgtggcagggaggaaaaggg
tttgctaggaacatcgtgttcaagcagattaagtgctacggagtgggccaacccatcatc
atcgaccagtactactgcgaccacgaacgttgcaggaatcaaacatcggcggtagaagta
agcaatgtgagatacagtggaatagaagggacttcaaaagaggagacggcagtgagattt
gcgtgcagcgagtcagttccatgcaaagatatacttttgagcgacgtcaatcttggctcg
agtcagggccaaactgaaacgacgtcgctgtgtctgaacgtccaaggcaggcaacgtggc
gacatttcccccagtgtcccttgcctctcccattaa
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