Diospyros lotus (date-plum): 127804952
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Entry
127804952 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127804952
KO
K10756
replication factor C subunit 3/5
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03030
DNA replication
dlt03410
Base excision repair
dlt03420
Nucleotide excision repair
dlt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127804952
03410 Base excision repair
127804952
03420 Nucleotide excision repair
127804952
03430 Mismatch repair
127804952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dlt03032
]
127804952
03036 Chromosome and associated proteins [BR:
dlt03036
]
127804952
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127804952
DNA replication proteins [BR:
dlt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127804952
DNA Replication Termination Factors
ELG1-RFC complex
127804952
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127804952
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127804952
Check point factors
HRAD17(Rad24)-RFC complex
127804952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
AAA_16
Phage_H_T_join_3
DUF815
Rad17
nSTAND1
RsgA_GTPase
WSK
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
127804952
NCBI-ProteinID:
XP_052198032
LinkDB
All DBs
Position
6:9787240..9796155
Genome browser
AA seq
804 aa
AA seq
DB search
MESSSSTRYSRSSQPQSLAAIQRKSGYEPSDTETEQHESRWRDFNRRNGDIGLEGFNLNP
DQGRTISPLRLSRRHSARFFDGETSSPTEPLRSSPPRRRHSKSPYKPRRDDGNVRSPSPV
SGFPGNGNPLSPELASDSRRNVSPFSKLEGRRHISPYKPAGDELNWGQNDSISSNAKQNR
MQDDKNVSIRERKVNEVSRASGKSNYSHRSLSAPRPRSRENDQQIRSGHTQQNGYRTPSP
LPGSMSLKDRKASHRNTPSVGELNEMVADAKISRVPLTGGPDFESTDSISQGDIFFSRDY
ANLTMTMQKIVFPKKDFAESRFNSKPQKFTGRDPTSHQQNKTNGNFGHSYQRNSSSTVLT
QTISSSAASRQTSDKISSSSGRFSAISGRSSASFGKFVTNRKKSQSEAWFSCLKKGSCRT
LKSPEKTKEFDEASMIEKAFVVEGLRQFWADKHQPASLNGFTCHRQEAQVLKQLVSEGVC
PHILLGGPSGSGKKSLIKALLREIFGEPASDISHDLGHFHIQETRPVEVAVSVTSSSHHV
ELNVYLEPNARYALMALVKQISSSYAITTEISSANPEADYKVMVLYEVDKAAENIQHLIK
WIMDCYTDSCKLILCCEDDLNILEPVRNCCKIIKVDPPVTHEIMEVLGQIARKEDFDLPT
SFAAKIASKSKHNLRKAIMALEACKAHNYPFVEEQPIPLGWEEVLEELAAEILADPSHKR
FFAVRGRIQKLLMDFVHPKLILQKLVEQFLKGVEASSKRELYFWHGYYDKRLPAGTSALL
KLEEFVAKFMGIHRKNISNLQNHS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggagagttctagttcaacacggtatagcaggtcatctcagcctcaatccttggctgca
attcagaggaagagcggttacgagccatctgacacggagactgagcagcatgaaagtcgc
tggcgcgatttcaatcgaaggaatggagatattgggttagaagggtttaatttgaatccg
gatcaaggcagaactataagccctttgagacttagccggagacactctgcgaggtttttc
gacggtgaaacttcctctcccactgaacctttgagatccagtccccctcggaggaggcac
agtaaatctccttataaaccgcgtagagatgatggtaatgttcgctctccttcaccggtt
tctggtttccctggaaatggtaaccctctttcacctgaacttgcttcagattctagaaga
aatgttagccccttttcaaagttagagggtcgcaggcatatttctccatacaaacctgca
ggagatgaacttaactggggccagaatgattcaataagttcaaacgcaaaacagaaccgc
atgcaggatgacaaaaatgtcagcattcgggaaaggaaggttaacgaagtaagtagggcg
agtgggaaatcaaactatagccataggtctctttctgctccaagacctagatcaagagag
aatgatcaacaaattagatctggtcatacacaacaaaatggttataggacaccctctcca
ctgccaggaagcatgtctctgaaagacaggaaggcttctcatagaaatactccttcagtt
ggtgaactcaatgaaatggttgccgatgcaaagatttctagagttccattaactggaggt
ccagatttcgaaagcacggactccatttcacagggtgatattttcttttctcgtgattat
gcaaacttgacaatgacgatgcagaagattgtcttcccaaagaaggattttgctgagagc
agatttaattcaaagcctcaaaagtttactggaagagatcccacttctcatcaacaaaac
aaaacaaatggtaattttggtcatagctaccagaggaattcatccagtactgttttaact
caaacaatctccagctctgctgcaagcaggcagactagtgataagattagcagcagtagt
ggtagattcagtgccatcagtgggaggagtagtgcaagctttggaaaatttgtgacaaac
agaaagaagagtcagtcagaagcatggttttcctgtctaaagaaaggatcgtgcaggacg
ttaaaatcaccagaaaaaactaaagaatttgacgaagcttctatgattgagaaggcattt
gtagttgaaggactgagacagttctgggctgataaacatcagcctgcttcgcttaatgga
ttcacttgccacagacaagaagctcaagtactcaagcaacttgtgtccgaaggagtatgt
ccacacattctgctcggaggaccttctggatctggcaaaaagtcactaataaaggctctt
ctacgtgaaatttttggagaacctgcttcagatatctctcacgacttaggacactttcat
attcaggaaacaagaccagtggaagtagctgtttctgtaacctccagttctcatcatgtg
gagctgaatgtatacttggaacctaatgctagatatgcactaatggctttggtcaagcaa
ataagcagcagctatgccattaccactgaaatcagtagtgcaaatcccgaagcagattat
aaagtaatggttctttatgaggttgataaagctgctgagaacattcaacacttgataaaa
tggatcatggactgttacacagattcttgcaaactcatactctgctgtgaagatgatctg
aacattcttgaaccagttagaaactgttgcaaaattattaaggttgatcctcctgtgact
catgaaatcatggaggttcttggtcagatagctaggaaggaagactttgacctaccaacg
agttttgctgctaagattgcttccaagtcaaagcataatctaagaaaagcaattatggct
cttgaagcatgcaaagcacacaactatccctttgttgaagagcaaccaattccacttgga
tgggaagaggtcttagaggaacttgccgcagaaattctagctgatccatcacataagaga
ttttttgcagtacggggaaggattcaaaaacttctcatggattttgttcaccccaaactg
attctgcagaagcttgtggaacagtttcttaagggagttgaagctagttcgaaaagagaa
ctttacttttggcatgggtactatgataagaggctcccagctggaacaagcgcattgctg
aagctcgaagaatttgttgcgaaattcatgggcatacataggaagaacatcagcaatcta
cagaaccactcatag
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