Diospyros lotus (date-plum): 127804996
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Entry
127804996 CDS
T10632
Name
(RefSeq) DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dlt03029
]
127804996
Enzymes [BR:
dlt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127804996
Mitochondrial biogenesis [BR:
dlt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
127804996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
DUF6092
DUF3047
GNAT_acetyltran
Motif
Other DBs
NCBI-GeneID:
127804996
NCBI-ProteinID:
XP_052198101
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All DBs
Position
6:4528113..4547449
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AA seq
1029 aa
AA seq
DB search
MSCSKIPIYPFVEIDHCIPIDKPAKFRPNPSKIHTVMWRNIAKLVSFKTLPRNSLNTHSF
PRARSFLRVSRDSNFPDKVRLGIFEMGSCPNTGFHEMNFLGAGEFAPGNQFLGRLTRGCS
RSQASVYGLCPKSYASVAEAVRVSSTDVEDEVQELPNELREEEKRDTNFRRRRMERGMSY
GKYQRLRRRQVKIETEAWEQAAEEYKELLKDMCEKKLAPKLPYMKSLFLGWFEPLRDKIA
AEQGLCQQGKFKTAYAPYIDQLPADMMAVITMHKLMALMMVGGHSAEYGSVRVVQAACTI
GDAIEQEARIHKFLAKRKKKMVDNANAPNTEGDDSSTKVQKQEKLRKTVRNLLKKQKLVA
VQRILKEHAKSQPWSQDVKAKVGSRLIELLIETAYVQPAVDQLTDVPPNVQPAFVHTFKT
VVKEANRNTGKRYGIIKCDPLVVKGLERTARHMVIPYMPMLVPPLKWRDYDKGAHLFLPS
YVMRTHGSRQQREAVKRAHKKQLEPIFEALDTLGSTKWRVNKRVFSIVDRIWASGGHLAD
MVDRSNIPLPEKPDTEDESLLRKWRWRAKSVKKENAERHSQRSDLELKLAVAQKMKDEEG
FFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGMSGLRWLKIHLANLFGGGV
DKLSYEGRIAFAENHLDDIFDSADQPLEGRRWWLNAEDPFQYLAACINLSDALRSSSPEA
TISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVAGENPADVYSGIAARVLDIVRKDAQ
KDPAIFPNALHAKILVNQVDRKLVKQTVMTSVYGVTYIGARDQITRRLKERHAIEDDAEL
FGAACYAAKTTLTALEEMFQAARSIMNWLGDCAKIIASENQPVRWTTPLGLPVVQPYCQA
GRHLVKTSLQVLSLQRETERIMVKRQKTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGV
HDSYWTHACDVDEMNRILRDKFVELYETPILENLLESFQKSFPLLCFSPLPERGDFDLRD
VLESPYFFN
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcagtaaaatccccatttatccctttgtagagattgatcactgtattccaatt
gataaacctgcaaagtttcgaccaaacccttcaaagattcacacagttatgtggagaaac
attgccaagttagtctctttcaaaaccctaccgaggaattcgctgaatacccactctttc
cctcgcgcccgcagttttctcagggtttccagagattcaaattttcccgataaggtcagg
ctcgggatcttcgagatgggttcttgccctaacactggatttcacgaaatgaattttctt
ggagctggagaattcgcgcccggcaatcagtttctggggagactcactcgtggttgttcc
agaagccaagcgagtgtttatggattgtgtccaaaaagctatgcaagcgtcgctgaggcc
gttcgagtgtcctcaaccgatgtggaggacgaggttcaggagttaccgaatgagctaagg
gaagaagagaaaagggacacgaactttaggcggcggaggatggagaggggaatgagttat
gggaagtatcagcggctacggaggcggcaggtgaagatagagacagaggcttgggaacag
gccgcggaggaatacaaggagcttctaaaggacatgtgcgagaaaaagttggctccaaag
ttgccatatatgaagtcattgtttctcggttggtttgagcctctgcgggataaaattgcc
gctgagcagggattatgccagcaggggaagtttaaaaccgcttacgctccgtatattgat
cagttaccagctgatatgatggcagttatcacaatgcataagctgatggcgttgatgatg
gtcggtggccattctgccgagtatggcagtgtgagagttgtacaagctgcttgcaccata
ggcgatgctattgagcaagaggcaaggatacacaaatttttggcaaaaagaaaaaagaaa
atggttgataatgcaaatgcaccaaatactgaaggagatgattctagtactaaagtgcaa
aaacaagaaaaactaagaaaaacagtcaggaatttgttgaaaaaacagaagctggttgca
gtacagcggattttgaaggaacatgccaaatcacaaccttggagccaggacgttaaagct
aaggttggaagccgtctaattgagttactgatagaaactgcctatgtacagcctgcggtt
gatcagttgactgatgtcccacctaatgttcaacctgcatttgtacacacattcaaaact
gtagtaaaagaagcaaacaggaacacgggcaaaagatatggtattatcaaatgtgatcct
ctagttgtcaagggcctggagagaactgccagacacatggtgattccttacatgccaatg
ttggtgcctccactcaaatggagagactatgacaagggagcacacttgttcttaccatcc
tatgtaatgcgcacacatggatcaagacaacaacgtgaagcggttaagagggctcacaag
aagcaactagagccaatttttgaggccttggacacacttgggagtactaaatggagggta
aacaaaagggtttttagcattgtagataggatatgggctagtggaggtcatcttgctgat
atggttgaccgcagtaatatacctttaccagagaaaccagatacagaagatgaatctctg
ctcaggaagtggaggtggagagctaagtctgtgaaaaaggaaaatgcagagagacattcg
cagcgaagtgatttggaacttaaacttgctgtagcacagaaaatgaaagatgaagagggt
ttcttctatcctcacaacctggactttcgaggtcgtgcataccctatgcatccatactta
aaccatcttggttcagatttgtgccgcgggattctagaattttctgagggacgccctctt
ggaatgtcaggcttacgctggctgaagatacacttggctaatctttttggtggtggtgtg
gacaaattgtcttatgaaggtcgaatagcatttgcggagaatcacttggacgatatcttt
gactctgcagatcaacctcttgaaggaaggcggtggtggttaaatgcagaagatccattt
cagtatttagctgcatgcattaatctatctgatgctctgagaagctcatccccagaggca
accatttctcatattcctgtgcaccaggatggttcctgcaatggcctacagcactatgca
gcccttggaagagacaagttgggtgcagttgcagtcaatttggtggctggggagaatcct
gctgatgtctactcaggcattgctgctagagttcttgatatagtgaggaaggatgctcag
aaagatcctgcaatatttcccaatgcactgcatgcaaagattttagttaatcaggttgac
aggaaattagtgaagcagacagtaatgacatccgtttacggtgtcacttacattggtgct
cgggatcagatcacaagaaggttgaaggagcggcatgccattgaagatgatgctgaactc
tttggtgcagcttgttatgccgcaaaaaccacgttgactgcattggaagaaatgtttcaa
gcagctcgtagcatcatgaactggcttggtgactgtgcaaagataattgcatctgagaac
cagccagtgcggtggacaactccacttggacttcctgtggtgcagccttattgtcaagcg
ggaagacatcttgtcaagacctctctgcaggttttatcactacagcgggaaacggaaagg
atcatggtcaagcggcagaagacagctttccctccaaattttgttcactcgcttgatggt
tcgcatatgatgatgactgcagttgcctgcaaaagagcaggcttaaactttgcaggggtt
catgattcatattggacgcatgcttgtgacgtggatgaaatgaataggatactacgagac
aagtttgtggaactctatgaaacacccatactggagaatttattggagagctttcagaag
tctttccctttgttatgtttttcccctttgcccgaacggggagattttgacctgagagac
gttttagagtcgccctacttcttcaactga
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