Diospyros lotus (date-plum): 127805044
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Entry
127805044 CDS
T10632
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127805044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dlt04040
]
127805044
Ion channels [BR:
dlt04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127805044
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
IQ
TMEMspv1-c74-12
Motif
Other DBs
NCBI-GeneID:
127805044
NCBI-ProteinID:
XP_052198178
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Position
6:complement(3820288..3823780)
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AA seq
703 aa
AA seq
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MRPHSLFALPRWLGIARRRASSSDSNDDVVDDDNAVSNSVECYACTQVGLPVFHSTSCDQ
AHQPEWEASAGSSLVPIQSRPGKGVRSAANRRLSGPFGWVLDPRSKRVQRWNRAFLLARG
MALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTCVDGVHLFHLWLQFRLAYVSRE
SLVVGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLVVPRLIREEQIKIIMT
ILLLIFLFQFLPKVYHSICLMRRMQKVTGYIFGSIWWGFGLNLIAYFIASHVAGGCWYVL
AIQRVASCLRQQCRGNSQCNLRLSCSEEVCYQFLLPANTVGNPCGGNATAMFRKPLCLDV
NGPYPYGIYKWALPVISSNSLAVKILYPIFWGLMSLSTFGNDLEPTSHWLEVIFSICIVL
SGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSQLRQRVRHFERHRWA
AMGGEDEMELIKDLPEGLRRDIKRYLCLDLIRMVPIFHNLDDLILDNICDRVKPLVFSKN
EKIIREGDPVQRIVFIVHGRVKSSQNLSKGMVATSILDPGGFLGDELLSWCLRRPFIDRL
PASSATFSCTESTEAFGLDANHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQL
AWRRYVVRTRGQVTQAAENGGNEWLLRQYAAVFMSIRPHDHLE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccacactcgctcttcgctctcccgaggtggctcggaatagcccggcgaagggcg
tcgtcctcggacagcaacgacgatgtcgtcgacgacgacaacgcagtctcgaactcggtg
gaatgctacgcctgcacccaggtgggcctccccgttttccattccaccagctgcgaccag
gcccaccagcctgagtgggaggcctccgccggctcctcgctagtccccattcagagccgg
cccggcaagggcgtccgctcggcggccaaccggcgcctctcgggccccttcgggtgggta
cttgacccgaggagcaagcgggtgcagaggtggaacagggcgtttctgctcgcacgtgga
atggcgctggccgttgatcccctcttcttttacgcgctctccatcggccgcggcggttct
ccctgcctctacatggacggcgggctggcggccatcgtcaccgttctccgtacgtgcgtg
gacggggttcacctcttccacttgtggctccagtttcggctcgcgtacgtgtccagggaa
tccttggtggtcggctgcggcaagctcgtgtgggacgcacgtgccatcgcctcccactac
gtccgctccctcaaaggcttctggtttgacgtcttcgtaatcttacccgttccacaggct
gtgttctggttggtggtaccgagattgatcagagaagagcagataaagatcataatgaca
atacttctgctaatcttcttgttccaattcctccccaaggtgtatcacagcatttgcttg
atgcgcaggatgcagaaggtcaccggctatatctttggcagcatttggtggggcttcggg
ctcaatctcatagcctacttcatcgcctctcatgttgccggggggtgctggtatgttctc
gccatacagcgtgtggcatcgtgcctaaggcagcaatgccgcggaaatagtcagtgtaat
ctccgtttgtcctgctcggaggaggtttgctaccagtttctgttgccggcgaacacagta
gggaacccatgcggcggtaacgcaacggctatgttcagaaagccattgtgcttggatgta
aatggaccttatccttatgggatctacaaatgggctcttccagtcatctccagcaactct
ctcgctgttaagattctgtatcccattttctggggtttaatgtccctcagcactttcggc
aatgatcttgagcccacaagccactggctggaagtcatcttcagcatatgtattgttctc
agcggcttaatgttattcactctgttaattgggaacattcaggtgttcttgcacgcggtt
atggcaaagaagaggaagatgcagctgagatgccgggacatggaatggtggatgaggcgg
aggcaactgccatctcaacttagacaaagagtccgccatttcgaacgccataggtgggca
gccatgggaggagaagacgagatggaactcatcaaagacttgcccgagggcctacgccgg
gacattaaacgctacctctgcctagatctcatcagaatggtaccaatcttccacaatttg
gacgatctcatcctggataacatctgtgaccgcgtcaagccccttgtgttctccaaaaac
gagaagattatcagagaaggagaccctgttcaacgaattgtgttcatcgtccatggcaga
gtaaaaagcagccagaacctcagcaaaggaatggtcgccacaagcatcctggatcccggc
ggatttctgggcgacgagctcctctcgtggtgcctccgccggccgttcatagaccgcctt
ccggcttcgtccgccacgttttcttgcactgaatcgactgaagcgtttggtctggacgca
aaccacctccgctacatcaccgatcacttccgctacaaattcgccaacgagcggctgaag
cgaacggccaggtactactcctccaactggagaacctgggccgcggtgaacatccaattg
gcgtggcggcgctacgtcgtgaggactcggggccaggtgactcaggcggcggagaacggc
ggcaatgaatggctccttcggcagtacgccgccgtgttcatgtcaatccggccgcacgac
caccttgaatga
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