Diospyros lotus (date-plum): 127805999
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Entry
127805999 CDS
T10632
Name
(RefSeq) dicer-like protein 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dlt Diospyros lotus (date-plum)
Brite
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127805999
microRNA pathway
RISC loading complex
127805999
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127805999
NCBI-ProteinID:
XP_052198875
LinkDB
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Position
7:complement(31581439..31659408)
Genome browser
AA seq
1630 aa
AA seq
DB search
MEGCDGGGSLISPVTEHFSNLSVGGDEESSAEEQRTEKDPRKIARKYQADLCKIALEENI
IVYLETGGGKTHIAVLLMHEMRHLIKKPLKEICVFLAPTVPLVQQQAKVIQDDTDFKVGA
YCGGSKRLKSHQDWEKEMEEYEVFVMTPQILLRNLCHCFIRMDSIALLIFDECHYAQLDS
NHPYAEIMKVFYKLDRTKLPRIFGMTASPKLGKGSSIRTLESLLHAKVHYVEDRKELEKF
VASPKFKIYYYSRAVNSSSCPLEIYLRKLKDIKHQCLSTLSRKTIDHGSLKNMKKMLQRL
HDNLIFCLENLGLLGAFQACKILMRGDRSERNELIGAEENGGDDSLCNRYILQAASVFDG
ICTKVNSSSIRVDGVEADLSHNEALGEPLFSRKLLLLIDVLSTFRLQPNMKCIVFVNRIV
IARALSYLIQTIKILSSWKSDFLVGVHSELRSMSRKTMHSILEKFRSGELNLLVATKVGE
EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDRGNPKEMYLVEKFEKDEE
KMNDEIASERSHVEIVDFNETIYKVASTGATVSSGYSVLLLHHYCSKLPHDEYFHPKPEF
FNFDDEQGTFCRLILPSNAAIHEITSSPQSSSEAAKKDACLKACKELHKLGALSEFLLPG
QDDANEELVQDFSDSDSCDDETSRQELHEMLVPAALKEPWTDAEAPVCLHFYFINFSPKP
VDRIYVKFGLFVKAPLPVEAERMELKLCLPRGRLVMTELVPSGVVKFDRDEILQAQNFQE
MFLKVILDRSELIHDFASLGKNGFGDSSTSTFYLLLPVFLHESEKTLSVDWMLIKRCLSS
PIFTTQEEAQVGVFPHLSSHLELANGPHNINDVINSLVYVPCKDRFFFISDVVAEENGYS
LLKGSTNHIEHYIKVFGIHLLYPDQPLLKAKQLFCLDNLLRKRGNSAELREKEEHFIELP
PEICQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKDRLSASFPEGAKVTAHRVLEA
LTTEKCNEQFSLERLEVLGDAFLKFAVGRHLFLLHDTLDEGQLTRKRSKLVNNSNLFKLA
TKGKLQAYIRDQPFDPSQFFALGRPCSVLCSRETETAIHCSQGDSEKNVVDTEVRCNKSH
QWLHKKTVADVVEALVGAFIVDSGFKAATAFLQWIGIQVDFQASLVSNICSASAIFLPLT
ARVDIAALETLLGYRFHHKGLLLQAFIHPSFSAHLGGCYQRLEFLGDAVLDYLITSYLFS
VYPELKPGQLTDLRSLSVNNNSFANIAVHHSFHNFILCDSSSLCTSMDKYADFIGAVASQ
NVSREGPSCPKALGDLVESSIGAILLDAGFDLNCVWKIMLAFVDPVMSFSKLQLNPVREL
QELSQFYGWDLKFVSQKKGGTFLVEAKVKGEDVCATTSSSNISRKAARRKAAGKLFGILK
AQGYRTKTKPLEEVLKSSRKMEAKLIGYDEAAIDVTAPDAIPLHNLNLHEDSRSLCDAKV
HPISEEPKKISPSSIRSTRHPHHSQDLQSNSTIGDSSDLDTETGSSCNKSARSLLYEICA
ENCWKPSFECCNETGPGHLKEFTFKVSLNIEEASEEIEVFGGPRLRKKDAAEEAAEGALW
YLKNSGHLHN
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtgcgacggtggaggctctctcatatcgccggtgacggaacatttttcgaat
ctttcggtgggtggcgatgaggaatcgagtgccgaagagcagaggacggagaaggacccg
agaaaaatagcgaggaagtatcaggccgatctctgcaagattgctttggaggagaacatt
attgtatatctggaaacaggtggtggaaagactcacattgctgtgttgctaatgcatgag
atgcgccacttgataaagaagcccctgaaggagatctgtgtgtttcttgctcctacggtg
cctctggttcagcagcaagcaaaggtgatacaggacgacactgattttaaagtgggggca
tattgtggaggttcaaagcgcttgaagagccatcaagattgggaaaaggagatggaagaa
tatgaggtttttgttatgaccccacaaatacttttgcgcaatttatgccactgcttcata
aggatggactcgattgcacttctgatatttgatgagtgccactatgcgcaacttgacagc
aatcacccttatgctgaaatcatgaaagtcttctacaaactcgacaggacaaaacttccc
cgcatatttggaatgactgcctctccaaagttggggaaaggttcttcaatccgtactctt
gaatccttacttcatgctaaggttcattatgttgaggacagaaaagagttggaaaaattt
gtggcatctcccaagtttaaaatatattattatagtcgtgctgtgaacagttcatcttgt
cctcttgagatttacttgaggaaacttaaggatataaagcaccagtgtttatcaacacta
agcaggaaaactatagatcatgggagccttaagaacatgaagaagatgctacagagattg
catgataatctgatattttgtctggaaaatcttggccttttgggagcatttcaggcttgc
aaaattcttatgaggggtgatcgctcagagagaaatgaattgataggagcagaagaaaat
ggtggcgatgattcgctatgtaacaggtatatcttgcaggctgcctcagtctttgatggc
atttgtacgaaagtaaattccagttctattcgtgtagatggtgttgaagctgacttatcc
cacaatgaagctttaggggaaccacttttctcaaggaagcttttactacttattgatgtt
ctatccacctttaggttgcaaccaaatatgaaatgtatagtctttgtgaacaggattgta
attgccagagccttgtcatacttaattcagaccattaagattttatcatcttggaagagt
gattttcttgtaggagtccactcagaactgaggagcatgtctcggaaaactatgcattcc
attcttgaaaagttccggtctggtgagctgaatttattagttgcaactaaagttggtgag
gaaggacttgatattcaaacatgctgcctggttatacggtttgatcttccagaaactgtc
tctagttttatacagtcaagaggtcgtgcacgcatgccgcaatctgaatatgcatttttg
gtggacaggggcaatccgaaggagatgtatctagtagaaaaatttgaaaaggatgaagaa
aaaatgaatgatgaaattgcatctgaaagatctcatgtggagattgttgacttcaatgaa
acgatatacaaagtagcttcaactggtgccaccgtcagttctggatatagtgtcttatta
ctccatcattattgttctaaacttccacatgatgaatatttccacccaaagccggaattc
ttcaactttgatgatgaacaagggacattctgccgactaattcttccttctaatgctgca
attcatgaaattaccagctcaccacaatcttcatcagaagctgctaagaaagacgcctgt
ttgaaagcatgcaaagaattgcataaattgggtgccttgtctgaatttctcttaccaggt
caagatgatgcaaatgaggaattggtgcaagacttttctgattcagacagctgtgatgat
gaaacttcaagacaagaattacatgagatgcttgttcctgctgcacttaaagaaccatgg
actgatgcagaggctcctgtttgtcttcacttctattttataaacttcagtcctaagcca
gtagataggatttatgtgaagtttggtctttttgtgaaagcacctctcccagtagaggct
gaaagaatggagctcaagctatgcctgccacgtggcagattagtgatgacagagcttgtt
ccatcaggtgttgtgaaatttgatagggacgagattctgcaggcacaaaattttcaagaa
atgtttctcaaagtcatccttgaccgatcagagttaattcatgattttgcttccttaggc
aaaaatggttttggtgattccagcacctcaactttctacttattgcttcctgtctttcta
catgaatcagagaagacactgagtgtagattggatgcttattaaaagatgtttatcatca
ccaatttttactactcaagaggaagctcaagttggtgtctttcctcatttaagcagccac
ttggaacttgctaatggtccccacaatattaatgacgtcataaatagtttggtttatgtt
ccatgcaaggacagatttttctttatttctgatgttgttgcagaggagaatggatacagc
ctgctaaaaggttcaacaaatcatatagagcactatattaaagtgtttggcattcatctt
ttataccctgatcaacctcttctaaaagcaaaacagcttttttgtttggataatttacta
agaaagagagggaattcagcagaattacgtgaaaaagaggagcacttcattgaattacct
cctgagatttgtcagttgaagataattggtttttctaaagatattggaagttcgttatct
ttgctgccatcaattatgcaccgtctagaaagcctccttgtggcaattgaactgaaggat
aggttatctgcttcattccctgagggtgctaaggttactgctcatcgtgttcttgaagca
cttacaaccgagaaatgcaatgaacaattttctcttgaaaggctcgaagtgcttggggat
gcattcctcaaatttgcagttggcaggcatctttttcttttacatgacacccttgatgaa
ggacaactgacaaggaagcgttctaaattagtcaacaattccaatttattcaagctggca
acaaagggcaagttacaggcatacatacgagatcaaccatttgatccctcccaattcttt
gcattgggtcgcccttgttcagtattatgtagtagagaaacagagactgcaatacattgt
tctcaaggagatagtgagaaaaatgttgtagacacagaagtgagatgcaacaaaagccac
caatggttgcataagaaaactgttgctgatgtggttgaggctctagttggtgcattcatt
gtcgatagtggcttcaaggcagcaactgcatttctccaatggattggcatacaagttgac
tttcaggcctcactagtcagtaatatctgctctgccagtgcaatcttcctgcctctcact
gctcgtgtggatattgctgcacttgaaactttgttggggtatcggttccatcataaaggt
ttgcttttacaagcattcattcatccttctttcagtgcccatttgggaggctgctatcag
aggctggagttccttggagatgccgttttggattatttaattacatcctacctgttttca
gtgtacccagaactgaagcctggtcaattaacggatttgagatctttatctgtaaacaat
aactcctttgccaatattgctgtgcatcactccttccacaattttattctgtgtgattca
agtagcctatgcacctctatggataaatatgcagacttcattggagcggtggcttcacaa
aatgtttccagggaaggacctagctgcccaaaggctcttggagacctggtggaatcttcc
attggtgccatacttcttgacgcaggttttgacttgaactgtgtttggaagataatgctt
gcttttgtggatccagtcatgagcttttccaagttgcaacttaacccagtaagggagctt
caggagcttagccagttctatggttgggacctgaagtttgtatcacagaaaaagggtgga
acattcctggttgaagcaaaagtgaaaggtgaagatgtttgtgcaaccacttcttcttct
aacattagtagaaaagctgccagaagaaaggctgcaggaaagttatttggaatattgaag
gctcaaggttacagaacaaaaacgaaaccgttggaggaagttctgaaatcaagccgtaag
atggaagccaaactaattggatatgatgaagcagcaatagatgttactgctccagatgct
attccgttgcataaccttaacttgcatgaagattctagaagtctctgtgatgcaaaggtg
catcccattagtgaagagcctaaaaagatttccccttccagcatcagatctacgagacat
ccccatcattcacaggatctgcaatctaattcaaccattggagatagcagcgatttggac
acagagacaggtagctcatgcaacaaatcagcaaggtcactgttgtatgaaatttgtgct
gaaaactgttggaagccatcttttgaatgttgtaatgaaacaggaccaggccatctaaaa
gaatttactttcaaggtgtctttgaacattgaagaagcctcggaagagattgaggtgttt
ggaggtcctcgtttgaggaagaaagatgcggcagaagaagcagctgaaggggcactttgg
tacctaaagaattcagggcacttgcataactag
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integrated database retrieval system
