Diospyros lotus (date-plum): 127806030
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Entry
127806030 CDS
T10632
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127806030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127806030
Spliceosome [BR:
dlt03041
]
Complex B
Other components
Prp19-related factors
127806030
Complex C
127806030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
COG2_N
Motif
Other DBs
NCBI-GeneID:
127806030
NCBI-ProteinID:
XP_052198940
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All DBs
Position
7:36441514..36444228
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AA seq
601 aa
AA seq
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MAALKDLLPPVKSSGSAYYDHSNDPWFKQRYSAAEAERAVTIKANPVPPYLKRDGFRPSK
PEDFGDGGAFPEIHYAQYPLGMGRKTDARPGQKTLPVTVDEHGNVTFDAVVKQNENASKI
VYSQHRDLVPKILKSENDEEEDLDELQKEIEETTEQTKAELEKIVNRRLSAAQPKNVPTQ
SADSKFIKYKPSAQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPVMH
SPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEAL
YVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAQKARAERTGAAPPASVPMPSDKS
MMDDADMRGEYERVKEKDAPKETKEEREERLQREKIREERRRERERERRLEAKDVAMGKK
SKITRDRDRDISEKVALGMASTGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGL
FTAQPTLSTLYRPKKDVDADMYGGADEQMEKIMKTDRFKPDKAFAGTSEKTGPRDRPVEF
EKEAEEADPFGLDQFLTEVKKGKKAMDKIGSGGTMKASAGSSMREGHEGSSRSRIAFERG
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctcaaggatcttcttccacctgtgaagtcatctggatctgcatactatgat
cactccaatgatccctggttcaagcagaggtacagcgctgcggaagctgagcgtgcagtg
actattaaggccaatccagtgccaccgtacctgaaacgtgatgggtttcgtccctctaag
cccgaagattttggcgatggtggggcgtttcctgaaattcattatgcccagtaccctctt
ggtatgggtaggaagactgatgctagacctggtcagaagacactgccagtcacagtcgat
gagcatggtaatgtgacttttgatgcagttgtgaagcaaaatgaaaatgcttcaaagata
gtctattcccagcatcgagaccttgtgccaaagattttaaaaagtgagaatgatgaggaa
gaagacttggatgagttgcagaaagagattgaggagacaaccgagcagacaaaagcagaa
cttgagaagattgtgaataggaggttgagtgctgctcaaccaaaaaatgttccaacacaa
tctgctgattcaaaattcattaagtataagccatcggctcagagtgcagcttttaattca
ggtgcaaaggagaggattatcaggatggttgagatgcccgtggatccactagagccaccg
aaattcaagcacaagagggttccaaaggcctctggttctcctcctgtcccagtgatgcac
tctccaccacgtcctgtgactgtcaaggaccaacaagattggaagattccaccatgtatt
tccaactggaagaacccgaaagggtatacaatcccacttgacaagcgccttgcagcagat
ggtaggggcctacaggaggttcaaattaatgataattttgcaaagttgtcagaagcactg
tatgttgcagaacagaaggctagggaggctgttgcaatgaggtcaaaagttcaaaaggag
atgatgatgaaggagaaggaaagaaaagaacaggaactgcgtgccttagctcagaaagca
cgagctgagaggacaggtgcagctcccccggcttctgttccaatgccttctgacaagagt
atgatggatgatgctgatatgaggggagaatatgagcgtgttaaagagaaggatgccccg
aaggaaacaaaggaggaaagggaggagaggttgcagagagagaaaattcgcgaggagcga
cgccgtgagagggagagggaaagaaggttggaggctaaagatgtggcaatgggaaagaag
agcaagattacaagagatagagaccgtgatatcagtgagaaggttgcccttgggatggca
tctaccggagcaggaagagggggtgaggttatgtatgaccaaagattgtttaaccaggag
aaggggatggattctgggtttgctactgatgatcagtataatgtctatgacaagggcttg
ttcacagctcagcccactctttctaccctgtacaggcctaagaaggatgtggatgctgac
atgtatggaggtgcagatgaacaaatggagaagattatgaagactgaccgcttcaaacct
gacaaggcatttgccggcacgtctgagaagactggtcctagggacaggcctgtggaattt
gagaaagaagcagaagaggctgatccatttggtttggatcagttcttgacagaggtgaag
aagggtaaaaaggccatggacaaaattggcagtggaggaactatgaaagccagtgctggg
tcatccatgcgagaaggccatgaaggatctagcaggtcgcgtattgcttttgaaagaggg
cgttga
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