Diospyros lotus (date-plum): 127806094
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Entry
127806094 CDS
T10632
Name
(RefSeq) transcription initiation factor IIE subunit alpha-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127806094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dlt03021
]
127806094
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
127806094
Prokaryotic type
Archaeal type
TFE
127806094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_SprT
Cas12f1-like_TNB
Zn_ribbon_8
Zn_Ribbon_TF
ADK_lid
A24_N_bact
Zn_ribbon_IS1595
HVO_2753_ZBP
HypA
Motif
Other DBs
NCBI-GeneID:
127806094
NCBI-ProteinID:
XP_052199067
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All DBs
Position
7:complement(27202607..27261255)
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AA seq
471 aa
AA seq
DB search
MSIEPFNRLVKLTARAFYDDITTKGENQPKTGRSDNRGIAVVVLDALTRRQWVREDDLAK
DLKLHSKQLRRTLRFFEEEKLVTRDHRKETAKGAKIYSAAIAATADGQQNGREGEEKIKL
HTHSYCCLDYAQIYDVVRYRAQRMKKKLKDELENKNTVQEYICPNCGKRYNALDALRLVS
FDDENFHCEHCNGELVAESDKLAAQEMGDGDDNARRRRREKLKDMLQKMEEQLKPLMDQL
NRVRDLPVPEFGNLHAWELRANAAGRATGGDSSANDSSKSSHGLGFGTPMPFVGETKVEV
AFSGVDEKGDIKSENASSPMKVLPPWMIKQGMNLTREQRGEAKEEMKMVGTSASLQLSDE
KKSITEKDDVKNIQDEYVKAYYAALLQRQREQDEAAKRQQEFSNNDILNGVYGTSERQVG
MKSKRDENEGDEDIWEEAAPAGNTGESYKVSDLNVQADASGDEEDDIWEEG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaaccattcaaccggttagtgaagctaacagcaagggctttttatgatgat
atcacaacaaaaggggaaaatcaaccaaaaactgggaggagtgataatagaggaattgct
gtggtggtacttgatgctctgaccaggcgtcagtgggtcagagaggatgatttggcaaag
gacttgaagctgcattcaaaacaacttcgtcggactttgcgcttttttgaagaagaaaag
ctagtcaccagggaccacaggaaagagactgcaaaaggtgcaaaaatatatagtgctgca
atcgctgccacagctgatggtcagcagaacggacgtgagggagaagagaagattaagctc
cacacgcactcttattgttgtctagattatgcacagatttacgatgttgtgagatacaga
gcgcaacggatgaagaaaaagctaaaagatgaactggagaacaagaacacggttcaggaa
tatatatgtcctaactgtggcaaaagatataatgcgttggatgcactacgactagtttct
tttgatgatgaaaacttccattgcgagcattgcaatggggagctcgtggcggagagtgac
aaattagctgcccaagaaatgggagatggagatgacaatgcaaggaggcgccgtcgtgaa
aagctgaaggacatgcttcagaagatggaggaacagcttaaaccactaatggatcaacta
aacagagtgagagatttaccagttcctgaatttggaaatctccatgcttgggaacttcga
gccaatgctgctggacgtgctactggtggcgattctagtgctaatgattcctctaaatct
tctcatggtcttggctttggaacacccatgccatttgttggggagacaaaggttgaagtt
gcgttttctggtgttgatgaaaaaggagatattaaatctgagaacgcaagttctcccatg
aaagttttgcctccttggatgattaagcaagggatgaaccttacaagagagcagcgtggg
gaggccaaggaggagatgaagatggtggggacttcagcatctctacagttatcagatgaa
aaaaagtcgataactgaaaaagatgatgtgaagaatatacaggatgaatatgttaaagcc
tattatgccgctttacttcagaggcaacgggagcaagatgaagctgccaagagacaacag
gagttttcaaacaatgacattttgaatggcgtttacggcacctctgagcgtcaagttggc
atgaagtccaaacgtgatgaaaatgagggagatgaagatatttgggaggaggctgcccct
gcaggcaatacgggtgaaagttacaaggtgagcgacctaaatgttcaagctgatgcatca
ggagacgaggaggacgatatatgggaagagggttga
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integrated database retrieval system
