Diospyros lotus (date-plum): 127806226
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Entry
127806226 CDS
T10632
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03082
ATP-dependent chromatin remodeling
dlt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127806226
03083 Polycomb repressive complex
127806226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dlt03036
]
127806226
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127806226
Histone modification proteins
HAT complexes
HATB complex
127806226
HDAC complexes
Sin3A-HDAC complex
127806226
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127806226
PRC2.2
127806226
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127806226
Heterochromatin formation proteins
Other heterochromatin formation proteins
127806226
Chromatin remodeling factors
NuRD complex
127806226
NuRF complex
127806226
NuRF complex (fruit fly)
127806226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
127806226
NCBI-ProteinID:
XP_052199336
LinkDB
All DBs
Position
7:complement(26245332..26266953)
Genome browser
AA seq
489 aa
AA seq
DB search
MEEESPAPPPSTVPRKRGRPRKERPKDEGERDETAADKLRDARKPQQQQHSDKYSNWKSL
VPILYDWLSSHNLLWPSLSCRWGPLLEQGKIKNRQRLYLSEQTDGSVPNTLVIANCDVVK
SRVAAAEHIVQFSEETRSPFVRKYKTIIHPGEVNRIRELPQNNNIVATHSDCPEVLIWDV
EAQPNRQAVLGAADSRPDLVLTGHQENAEYALSMCPAEPLVLSGGKDKFVLLWSIQDHIS
TLTSDAATVPTGSVGSNIKSTDNPSVGPRGIFQGHEDTVEDVQFCPSSAQEFCSVGDDSC
LILWDARVGSNPVFKVEKAHDADLHCVDWNPHDENFILTGSADHSVCLFDRRNLTSGGVG
SPIHKFEGHKAAVLCVQWSPHKSSVFGSSAEDGFLNIWDYEKVGEKNESSTSPGLFFQHA
GHRDKVVDFHWNAADPWTVASVSDNCDTSGGGGTLQIWRMSDLIYRPKEEVLAELEKFKE
HVIECTSKS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagtctccggcgccaccgccttctactgtgccgagaaagaggggcagacct
aggaaagagaggcccaaggacgagggagaaagagatgaaacagccgcagacaagttgaga
gacgccagaaagccccagcagcagcaacattccgacaagtatagcaactggaaatctctc
gtccccatcctctacgactggctttctagccacaaccttctctggccatctctctcctgc
cgctggggtccactactcgagcaagggaagatcaagaatcgtcaacgtctctacctctct
gagcagactgatggcagtgtgccaaatactctggtcatagcaaattgtgatgttgtcaag
tctagggttgcagctgcagagcacatagtacagttcagtgaagaaacacgctcgccattt
gtgaggaagtataaaactatcatacatcctggagaggtaaacagaattagggaacttcca
cagaacaataacatagtggcaacccattctgattgccctgaagttctaatttgggatgtt
gaagctcaacctaaccgtcaggctgtcctaggtgcagctgattctcgtccagatttggtg
ttgactggacatcaggaaaatgcagaatatgctctttctatgtgccctgcagagccttta
gttctctctggagggaaggacaagtttgttctcttgtggagtatccaagatcatatatca
acattgacctcagatgcagccactgtgcctacaggatctgttggatcaaacattaaaagt
actgataatccttctgttgggccacgtgggatcttccaggggcatgaggacacagttgaa
gatgtgcagttctgcccatcaagtgcacaggagttctgtagtgttggtgatgattcttgc
ctaatattgtgggatgcacgagttggctctaacccagtatttaaggttgaaaaggctcac
gatgctgatcttcactgtgttgattggaatcctcacgatgaaaactttattctaactgga
tctgcagatcactctgtttgcttgtttgatcgtcgaaatctaacatctggtggagtaggt
tcaccaatccacaagtttgaaggccacaaggctgctgttctctgtgtgcagtggtcaccg
cataagtcatctgtctttgggagttctgcagaggatggtttcttaaatatttgggactat
gagaaggttggtgaaaagaacgaatcaagtacttctccaggattgtttttccaacacgcc
gggcatagggacaaggtggttgacttccactggaatgcagctgatccatggacagttgca
agtgtatctgataactgtgatacgtctggcggaggtggaaccctacagatatggcgcatg
agcgacttgatttataggccaaaagaggaggtgctggcagaactagagaagttcaaagag
catgtgattgaatgtacttcaaagtcttga
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