Diospyros lotus (date-plum): 127806240
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Entry
127806240 CDS
T10632
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
Brite
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127806240
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127806240
Translation factors [BR:
dlt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127806240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127806240
NCBI-ProteinID:
XP_052199352
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All DBs
Position
7:1343808..1378007
Genome browser
AA seq
1031 aa
AA seq
DB search
MSLRLLGAPTTTHAAFAASYRYCLLSRIRTIMSHRPNFQGGRRGGGPAGGRGRRGRGGGR
GGGGGGGGGGGRGEQRWWDPAWRAERLRQQAAEMEALDENEWWGKMEQMKRGGEQEMVFK
RNYSRADQQILSDMAYELGLYFHAYNKGKTLVLSKVPLANYRADLDDVHGSTQKEIRMTT
DIERRVGSLLNSSKGAVSADNFPSASSQGSKQVVHGVDITKTESSFETDIDKERLNLELK
ERQEKMKARDNVRAMLSFREKLPAFKVKFKFLKAVAENQVLVVSGETGCGKTTQLPQFIL
EEEISSLRGGNCNIMCTQPRRISAISVAARISSERGENLGESVGYQIRLESQRTAQTRLL
FCTTGVLLRQLVQDPNLNGVSHLLVDEIHERGINEDFLLIILRDLLPRRPDLRLILMSAT
INADLFSKYFDNAPTIHIPGLTFPVSELFLEDVLEKTQYRIKSESDNFRGSSRRRKREQE
SKKDPLTELFEDVDIDSQYKSYSTITRQSLEAWSGAQLDLGLVESAIEYICRHEGDGAIL
VFLTGWDDISKLLDKVKVNSFLRDPSKFLVLPLHGSMPTINQREIFDRPPSNVRKIVLAT
NIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVC
YRLYPKLIHDAMPQYQLPEILRMPLQELCLHIKSLQFGAIGSFLAKALQPPDPLSVQNAI
ELLKTIGALDDGEELTPLGRHLCTLPLDPNIGKMLLMGSIFQCLNPALTIASALAHRNPF
LLPIDRKEEADDAKRSFAGDSCSDHIALLKAFEGWKDAKRYGKEKAFCWENFLSSVTLQM
MDDMRLQFLDLLTSIGFVDKSRGANAYNQYSNDLEMVCAILCAGLYPNVVQCKRRGKRTA
FYTKEVGKVDIHPASVNAGVHLFPLPYMVYSEKVKTSSIYIRDSTNISDYALLMFGGNLI
PSKTGEGIEMLGGYLHFSASKNVLELIRKLRGELDKLLNRKIEEPGFDISAEGKGVVAAV
VELLHAHNVGH
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcgcttgttgggtgccccaaccacaacgcacgccgccttcgctgccagctat
aggtattgtcttctctctcggatccgcactattatgtctcaccgccccaacttccaagga
ggccgtcgcggcggaggtccggctggcggtcgcggccgccgtggacgtggcggcggccgc
ggcggaggaggaggtggaggaggaggaggaggacgcggcgagcagcggtggtgggacccc
gcctggcgcgccgagcgcctgagacaacaagcagccgagatggaggccctggatgagaac
gagtggtggggcaagatggaacagatgaagagaggcggagagcaggagatggtattcaag
cgtaattatagtcgggcagaccagcagattttgtctgatatggcttatgaattggggctt
tacttccatgcatataacaaagggaagacacttgttttgagtaaagttccattggcaaat
taccgtgcggatcttgatgatgttcatggttccacccagaaagagatacgaatgaccaca
gatattgagagaagagttgggagtttattgaatagctcaaaaggggcagtgtcagcagac
aattttccaagtgcatcctctcaagggtctaaacaagtagtgcatggtgtagatattaca
aagaccgagtcttcatttgaaactgatattgacaaggagaggcttaatcttgaacttaaa
gaaagacaagagaaaatgaaggcacgtgataatgtaagggcaatgctgtcattcagagaa
aagctgcctgcattcaaagttaaattcaagtttttaaaagctgttgctgaaaatcaggta
ttagtcgtttctggagagacaggctgtggcaaaaccacacagcttcctcaatttattctc
gaggaggagatatcttccctacgtggtggcaattgcaacattatgtgcactcaacctcgt
cgtatatctgctatatctgttgcagctcgaatatcctctgaaaggggtgaaaatctaggt
gaaagtgttggttaccagatccgcctggaatcacaacgcacagctcaaacacggttacta
ttttgcaccaccggagtattgcttcggcagctggttcaagacccaaatttaaatggagta
agccatttgctagtggatgaaattcatgaaagaggcataaatgaggatttcctcttaata
attttgcgtgacctcctcccccgtcgtccagatcttcgacttattctaatgagtgccacc
attaatgctgatttattctccaaatactttgacaatgccccaactattcatatcccgggg
ctgactttcccagtgtcggagttgtttctagaagatgtgctggagaaaactcaatataga
atcaaatctgaatctgacaacttccgagggagttcaaggaggaggaagagagaacaagag
tctaagaaagatcctttaactgaattgttcgaggacgttgatattgattctcagtacaaa
agctacagcacgattacaaggcaatctctcgaagcttggtctggcgcacaacttgatcta
ggtcttgtggaatcagcaattgagtatatctgtcgtcatgaaggtgatggagccattctt
gtatttctcactggatgggatgacatttctaagcttcttgacaaagtcaaagtgaacagt
tttcttagagatcccagcaagtttcttgtccttcctcttcatggttcaatgcctaccata
aatcaacgtgaaatatttgatcgcccaccatctaatgtgagaaagattgtgctagcaaca
aatattgctgagagcagtataaccattgatgatgttgtatacgtaatagactgtggaaag
gcaaaggagactagttatgatgcactaaataagctggcttgtctgctgccatcatggata
tcaaaggcctctgcacatcagaggcgtggtcgtgccgggcgtgtgcaacctggagtttgt
tatagattgtatccaaagttgatccatgatgcaatgccccagtatcaactgccagaaatt
cttcgaatgcctctccaagagctatgcttgcatattaaaagtttgcagtttggagctatt
ggatcattccttgcaaaggctcttcagcctcctgatcctctctctgttcagaatgcaatt
gagcttctaaaaacaatcggggctttagatgatggggaagagctcactccacttggacgc
cacctatgtacgctacctttggacccaaatattgggaagatgcttctcatgggttcaatc
tttcaatgccttaatcctgcactgacaattgcttctgccctggcacaccggaacccgttt
ctccttccaattgacaggaaagaggaagctgatgatgctaagagatcatttgctggtgat
tcttgcagtgatcacattgcacttctcaaagcttttgagggatggaaggatgcaaaacgt
tatggcaaggaaaaagccttctgttgggaaaatttcctttcttcagtgacattgcaaatg
atggatgatatgagactccagtttctggatctactgacaagcattggctttgttgataaa
tccagaggcgctaatgcttataaccaatatagtaatgatttggagatggtatgtgcaatc
ctctgtgctggactttaccccaacgttgtgcagtgtaaaagaagaggaaagcggacggca
ttctacaccaaagaagttggaaaagtcgacattcatcctgcatctgtgaatgcaggagtt
catcttttccccctcccttacatggtctatagcgaaaaggtgaagacgagcagcatatac
atcagagattccacaaacatatcggactatgctctactaatgttcggtggcaatctcatt
cctagcaaaaccggtgaaggtattgaaatgcttggcgggtatcttcatttctctgcttca
aagaatgtgttggagttgatacggaaattgcgaggggaactcgacaagctcttaaacaga
aagatcgaggaaccagggttcgacatatctgccgagggaaagggagtagttgctgctgtg
gttgagctactccatgctcataatgtggggcattga
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