Diospyros lotus (date-plum): 127806407
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Entry
127806407 CDS
T10632
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127806407
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dlt01007
]
127806407
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlt03016
]
127806407
Enzymes [BR:
dlt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
127806407
Amino acid related enzymes [BR:
dlt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
127806407
Transfer RNA biogenesis [BR:
dlt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
127806407
Prokaryotic type
Other AARSs
127806407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Spexin
Motif
Other DBs
NCBI-GeneID:
127806407
NCBI-ProteinID:
XP_052199632
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Position
7:complement(27657990..27669446)
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AA seq
622 aa
AA seq
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MEGPADEIANPMADLSVTGTPSQPSKSAQKRELKNKQKEEERRRKEEEKAKKAAAMSNLQ
VQKPQAVDEEDMDPTQYFENRLKALASQKSAGINPYPHKFHASMSILEYIEKYKGLSNGD
HLEDVQISLAGRVMNKRSSSSKLFFYDLHADGAKVQVMADARTSDMDEAEFGKFHSAVKR
GDIVGVTGYPGKSKRGELSIFPRSFIPLSHCLHMMPRQKAGPGAENINVKDMWVPGSGRN
PETYILKDQETRYRQRYLDLMLNVEVRQIFKTRAKIISYIRSFLNNLDFLEVETPMMNMI
AGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPE
FTTCEFYMAFADYNDLMELTEKMLSGMIKELTGGYKIKYHANGLGNDPIEIDFTPPFRRI
DMIEELEKMANLSIPKDLSSNEANKYLANACLKLDIKCPPPQTTARLLDKLVGHFLEDTC
VNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFADQL
KDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMKPQ
DEPPAKGLRGFEEIMHVMRNIL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcccagctgatgaaatagcaaatccgatggcagatctatctgtgacgggcact
ccttcccagcctagcaaaagtgcccagaagagagagctaaagaacaagcagaaggaagag
gaacggaggcgtaaagaagaggagaaggctaagaaggctgctgccatgtcaaatttgcag
gttcagaagccccaagcagtagacgaggaggacatggatcccacgcaatattttgaaaat
agactgaaagcccttgcatctcagaagagtgcagggattaatccctatcctcacaaattt
catgcttcaatgtccatccttgaatacatagagaagtataaagggcttagcaatggggat
catctggaggatgttcaaatatctttggctgggcgagttatgaacaagcgatcctcttca
tcgaagttgttcttctatgatttgcatgcagatggtgcaaaagtacaagttatggctgat
gcaaggacatcagatatggatgaagctgaatttggcaagttccactctgctgtgaaacgt
ggagatattgttggtgtaactgggtatccaggaaaaagtaaaaggggggagttgagtatt
tttccaagatcattcatcccgttgtcgcattgtctccatatgatgccacggcaaaaggct
ggtcctggtgcagaaaacatcaatgtgaaggatatgtgggtccctggcagtggccggaat
cctgagacttacatactaaaggatcaggaaactcgataccgtcaaaggtacttggatttg
atgttgaacgtggaggttcgacaaatattcaaaacccgggcgaagattatttcttacatt
agaagctttctcaacaatcttgacttcttagaggttgaaacacccatgatgaacatgatt
gctgggggagcagctgctcgtccatttgtgacccaccacaatgacctgaacatgaagcta
tacatgcggattgctccagaactttatcttaaggagctagttgttggtggactggaccgt
gtctacgagatagggaaacaattcaggaatgagggaattgacttgacacataatcctgag
tttactacttgcgagttttatatggcttttgccgactataatgacttgatggagctgaca
gagaaaatgttgagtgggatgatcaaggaacttacgggtggctataaaattaaatatcat
gcaaatgggttgggcaatgacccaattgagatagacttcactcctccattcaggaggatt
gacatgatagaggagttggaaaagatggcaaaccttagcatacccaaggatctttctagt
aatgaagcaaacaaatatttggcaaatgcatgtctgaagttggatatcaaatgccctcct
ccacagacaactgctcgtctactggacaaacttgtggggcacttcctagaggatacatgt
gtgaaccctaccttcattattaaccatccggagataatgagtccattggcaaagtggcat
aggtccaagccagggcttactgaacgttttgaattattcatcaacaagcatgaactttgc
aatgcatacacggagttgaatgatcccgtggtacaacggcaacgctttgctgaccaactc
aaggaccgacaatcaggtgatgatgaagcaatggctttggatgaaacattttgtacggct
cttgaatatggtctgcccccgacaggtgggtggggcttgggtattgaccgacttgcaatg
ttgttgacagattcacagaacatcaaggaagttctgctgtttccagcgatgaagcctcag
gatgagccacctgctaaagggctgagagggtttgaagaaattatgcatgtcatgaggaat
atactgtaa
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