Diospyros lotus (date-plum): 127806470
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Entry
127806470 CDS
T10632
Name
(RefSeq) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127806470
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dlt01007
]
127806470
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlt03016
]
127806470
Enzymes [BR:
dlt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
127806470
Amino acid related enzymes [BR:
dlt01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
127806470
Transfer RNA biogenesis [BR:
dlt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127806470
Prokaryotic type
127806470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF7040
PI3K_P85_iSH2
YabA
Motif
Other DBs
NCBI-GeneID:
127806470
NCBI-ProteinID:
XP_052199753
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All DBs
Position
7:complement(16824280..16835744)
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AA seq
450 aa
AA seq
DB search
MLDINLFREDKGYNPEIIRESQRRRFASVDLVDEVIRLDKEWRQRQFEFETLRKDFNKIN
KEVGRLKIAGEDASEMIKSTEDNKELTAKKEVEVQEARAALYSKLEIIGNLVHDSVPVSN
DEANNAIIRSWGEKRSESNLKNHVELVELLGIADSKKGANVAGGRGFYLKGDGVRLNQAL
INFGLDFLEKRGFTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNE
SWDMHEEMIKNSEEFYKMLKLPYQVVAIVSGALNDAAAKKYDLEGWFPASSTYRELVSCS
NCTDYQSRRLEIRYGQKKSNEQVKQYVHLLNSTLSATERTMCCILENYQKEEGVEVPEVL
REFMGGKTFLPFLNNNNPATKEAKGKKSKA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgctggacataaatctctttagggaagataagggctacaatccagaaatcatacgtgaa
tctcagcgccgtcgatttgctagcgttgatcttgtcgatgaggtcattcgcctcgacaag
gaatggcgacagcgtcaatttgagtttgaaactctcaggaaagatttcaacaagataaac
aaagaagtcggcaggcttaaaattgctggtgaggatgcaagtgaaatgattaaaagtacc
gaggacaataaagagttgactgccaaaaaagaagtagaggtccaagaggcccgggcagca
ctgtattccaaattggaaataattggaaaccttgtccatgattctgttccagtaagcaat
gatgaggcaaataatgctataattcgatcttggggagagaaaaggtcagaatccaattta
aagaatcatgttgagctggttgaacttcttggaattgctgattcgaagaaaggtgctaac
gtagcaggaggcagaggtttctatctgaaaggtgatggtgtgcgccttaatcaagcttta
attaactttggtcttgattttttggagaaaagaggattcactgcattgcagactccattc
ttcatgaggaaagatatcatggcaaagtgtgctcaattagcacaatttgatgaagaactt
tacaaggtaactggtgagggagatgacaaatatttgattgctacagctgagcagccactc
tgtgcttatcatctagatgattggatccatccatcacagctaccactaagatatgctggg
tactcgtcttgcttccgtaaagaagctgggtcacatggtcgggatactcttggaattttc
cgggttcatcaatttgagaaagtggagcagttctgtattaccagcccaaacggcaatgaa
tcttgggacatgcatgaggaaatgattaaaaactctgaggagttttacaagatgctaaaa
ttaccctatcaagttgttgccattgtatctggtgctttaaatgatgcagcagcaaaaaag
tacgatttggagggatggtttcctgcatccagtacttacagggagcttgtgtcatgttca
aattgtactgactatcagtccaggagattggagattcgatatggacagaaaaagagtaac
gagcaggtgaagcagtatgttcacttgttgaactcgaccctaagcgcaacagagaggacg
atgtgctgcatacttgagaattaccagaaggaggagggcgttgaggtaccggaggtcctg
cgagaattcatgggtgggaagaccttcctgcccttcttgaacaacaacaacccggccacc
aaagaagccaaggggaagaaatccaaggcctaa
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