Diospyros lotus (date-plum): 127806962
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Entry
127806962 CDS
T10632
Name
(RefSeq) zinc finger CCCH domain-containing protein 16 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127806962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127806962
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127806962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
127806962
NCBI-ProteinID:
XP_052200551
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All DBs
Position
7:37799157..37810994
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AA seq
404 aa
AA seq
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MPQKKEICRNFQRGSCQYGERCKFLHVTSQQSKPNVFGFGMQTSMPFQGSNSQQQKPNPF
GFGVQGSAQRGGSNEIRPQFKPFENKWSRFSSTNAGGSQSSQQPDNQPMSASHKCTDPEL
CKRQIIEDFEHERPLWKLTCYGHGKSSPCDITGDISFEELRAVAYDDAKRGLSLQSIVER
ERSLLNTKLLEFESLLRNPYSVPRDAAAIANQGAFPGATPSLSSLTAQNSNAPSVSSFSQ
LGASLNLVSAAKAASPQNNAFVQPSPVQLPNQTTHLFGTNNSPFGFPGSLGSQPRSQFPN
QSLGSSLALDTSTFSNNAATAEQNPFAASMAWPQIPNSAGVQFPILPNGLNTISTAVGQV
SATVDTRSDSVQSENGGVDDSIWLKEKWNPGEIPEIAPPAKYIF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaagaaagaaatctgcaggaattttcagcgtggaagctgccaatatggtgaa
cggtgtaagtttcttcacgtgacttcacaacagtcaaaaccgaatgtttttggctttgga
atgcaaactagcatgccatttcagggatcaaattcacaacagcaaaagcccaatcctttt
ggatttggtgttcagggcagcgctcagcgaggaggttccaatgaaatcaggccccaattc
aagccttttgagaataagtggtcccgtttctcctccacaaatgctggtggatcccaatca
tcacaacaacctgataatcagcctatgtcagctagccataaatgcacagaccccgagttg
tgcaaacgccaaattattgaggattttgaacatgagagaccactttggaagcttacatgc
tatggccatggtaaaagttctccttgtgacattacaggggatattagctttgaggaattg
cgagcagtagcatatgatgatgctaagcgtggattgagcttgcagtcaattgttgagaga
gagaggagtttactgaataccaagttacttgaatttgaaagcctactgcgtaatccatat
tcagttccacgagatgctgctgctattgccaaccaaggtgcttttcctggggccactcca
agtttatcatcattgactgctcaaaatagcaatgctccttcagtttcaagtttcagtcaa
cttggtgcttcacttaatttggtttctgctgcaaaagctgcttctccacaaaataatgct
tttgtgcaaccaagccctgtccaactccctaatcagactacacatttatttgggacaaac
aactcaccatttggatttccaggttcacttggaagccaacctcgtagccaatttcctaac
caatcacttggaagttcacttgccttggacacatcaaccttcagcaacaatgctgctact
gcagaacagaatccttttgccgcttcaatggcatggcctcaaattcctaactctgccggt
gtccagtttcccatacttcctaatgggttaaacaccatctctactgcagttggacaagta
tctgcaactgtggacactagaagtgatagcgtgcaaagcgagaatggtggtgtagatgat
agtatctggttgaaagagaaatggaatcccggagagattccggaaatagcacctcctgcc
aaatatattttctaa
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