Diospyros lotus (date-plum): 127807093
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Entry
127807093 CDS
T10632
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127807093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127807093
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127807093
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Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_Zer-1
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
127807093
NCBI-ProteinID:
XP_052200671
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Position
8:5195346..5201583
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AA seq
365 aa
AA seq
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MVGREELRMTHDLELCFEKLMAGGYRGGGVITEWKNAPAELLLRILSLVDDRTVIVASGV
CRGWRDAICWGLTQLSLCWCKKNMNNLVLSLAPKFTKLQMLILRQDTPQLQDKAVEAIAN
CCHDLHELDLSKSFKLSDCSLYALAHGCPNLTKLNISGCSAFSDVALAYLVNFCRKLKYL
NLCGCGKAASDKALKAIGYNCRQLQSLNLGWCENVGDPGVLSLAYGCPDLRALDLCGCIL
ITDDSVIALANNCLHLRSLDLYYCRNITDKAMYSLAQSRVRNKHEMWESAKNRYEEEGLM
NLNISQCTALTPPAVQALCDSFPALHTCSGRHSLIISGCLSLTSVHCACAVQAHRAPGVF
PRPAH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggttggccgagaggagttgaggatgactcacgacctggaactgtgctttgagaaactg
atggcgggcggctaccgcggcggcggagtgatcaccgagtggaagaacgctccggcggag
ctcttgttgcggattctttcacttgtagatgaccgcacggtgatcgttgcttcgggggtg
tgccgtgggtggagagatgccatttgttgggggctcacccagctctctctctgttggtgc
aagaagaacatgaacaacttggttctatctcttgctcctaaattcacaaaactgcagatg
ctaattctgcgtcaggatacaccacagctccaagacaaggccgttgaggcaattgcaaat
tgctgccatgatctgcacgagttagaccttagcaaaagcttcaagcttagtgattgctcc
ctctatgcattggctcacggttgtccgaatcttacaaaactcaacataagtgggtgttct
gctttcagtgatgtagctcttgcctatttagtcaatttttgcagaaagttaaaatatcta
aatctttgtggatgcgggaaagctgcatctgacaaggctttgaaggctattggatataac
tgccgtcaattgcagtctttgaatctgggatggtgtgagaatgtgggtgatccaggggta
ctgagtttagcatatggatgccctgatctaagagctcttgatttgtgtggttgtattctt
ataacagatgacagtgttatagctttggcaaacaactgccttcatctcagatcccttgat
ctctactactgccgaaatatcacagacaaagctatgtattctctggcacaaagtcgagtg
aggaacaagcatgaaatgtgggaatctgcgaagaacaggtacgaggaggaaggcctaatg
aatctcaacatcagccagtgcacggcccttactcctccagctgttcaggcattatgcgac
tcatttcctgcacttcacacttgctcaggaagacattccctcataataagtggatgtttg
agcttgacatcagtgcattgtgcctgtgctgtccaagcacaccgcgcacccggtgtattt
cctcgtcctgctcactga
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