Diospyros lotus (date-plum): 127807364
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Entry
127807364 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127807364 isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dlt04121
]
127807364
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127807364
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127807364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
PHD
PHD_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
127807364
NCBI-ProteinID:
XP_052201120
LinkDB
All DBs
Position
1:complement(49034343..49056104)
Genome browser
AA seq
1684 aa
AA seq
DB search
MGRRKQLRPHRSVGTAQSRETAGQESTEQDASGRAQRDEPFNVGKPFFVEVDRSNWDSSE
HFDISELLLTNLNVSREFWGCKLNENFYQDSKYSLRIRLCNVDEFLGRMRLGHWPVLPAS
DIYLEFVEKSIQDEAVIVFGGFDGPDEGVTALVHLANLKFLTLRPVLGVTFSEETPSLRV
RVEMLKGAFDACDSLLDTTRQLWKKSLMNVMSWVRPEVMTSEARYGCYESAGVEFGLHEE
MDRDAWSSRKQARFDAAGFYEAIKPSKENPMLEDNIPDLLPKLRPYQRRAAYWMVQREKG
ASECSSASERSQFLSALCVPLNLIDTCSTVFYNPFSGNVSLHPERSSSHVFGGILADEMG
LGKTVELLACIFAHRKPSSEAGNGIDDMIQMAEDQKANLKRLKRERIECICGAVSESSKY
KGLWVQCDICDAWQHADCVGYSTRGKTSKSREASKGQGCKNKQTENSGKRARRNNDAKIV
DMDGDYICQLCSELIQATHAPIATGASLIVCPAPILQQWHAEIIRHTNPGSLKTCVYEGV
RNRPLSNPSLMDISELVNADIVLTTYDVLKDDLSHDTDRHEGDRRIMRFQKRYPVLPTFL
TRIYWWRVCLDEAQMVESSVTAATEMALRLHTKHRWCISGTPIQRNLDDLYGLLRFLKAC
PFDVQKWWIEVIRDPYERGDIEAMQFTHKFFKQIMWRSSKGHVADELQLPPQEESLTWLS
FSPIEEHFYQRQHETCVSYAREVIEGFKDDILKQKVTGSMLSDATFDPFITQVEAAKLLN
SLLKLRQACCHPQVGSSGLRSLQQSPMTMDEILSVLIGKTKVEGEEALRKLVVALNGLAG
IAVIKQDFSPAASLYREALGLAKEHSEDFRMDPLLNIHIHHNLAEILPLTSDYLQHLDSN
EQPPESSKRKASSVSNYEDCVQFDGKRSKLSGEDSDCAFTAENLPRFASGPLTHVKECDQ
KAHRDSKTFDDGYLRTACENLKEKFLSVFNSKLSLAQQEFRKSHLQVCKAFDDRKNQDIW
WLEALHHIEQNKDSSSELIRKIGEAISSKLNVSRTSKIASCFRSITALKYYIQTGLDSLE
DSRKTLLDRLVEIDKTMENPREEDIERVRYCPNCQPNVDGLICVHCELDELFQVYEARLF
RLNKAHDGGFIISVEEAVEQQKRKSALNRFYWALSRPDKNSTSSSAQYEDNHVGKRDVGE
KVVVSRSPSELEVVLGIVKNFSKALLGRDGTETASKQLMLLEGMRKEYAQARSLAIAQAQ
VLRAHDEIKMATSRLRLRENDDDKSIDALSLGELEAASVENSSDKFLALTTLSRIKGQLR
YLKGLIQSKQKMQVENTNCPSLDEVAMVSSSSTTEEETGSVVKADEETCPVCQEKLQNQK
MVFQCGHITCCKCLFAMTEQRFNHHGKLHHKWVMCPTCRQHTDFGNIAFADDGQNKSDSA
PQGCENIEACVTVHGSYGTKIEAITKRILWISSTDPRAKLLVFSSWNDVLDVLEHAFTAN
SISYIRMKGGRKAQFAISHFKGQSCVKGIGKVHNQQAETSSVRVLLLLIQHGANGLNLLE
AQHVILVEPLLNPAAEAQAVGRVHRIGQENKTIVHRFIVKNTVEESIYKLNRSRAMSSYI
SGNTKNQDQLVLTLKDVESLFAATPSTVPETDEKPTGSLMHLPPAVAAAIAAEKRLKEQT
GKPS
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaagaaagcaactacggccgcatcggtcagtggggacagcgcaaagccgcgag
actgccggacaggaatcgaccgagcaagatgcttctggacgtgcgcaaagagacgaacct
tttaatgttgggaaaccattttttgttgaagttgataggagcaattgggattccagtgag
cattttgatatttcagaacttctcttgacgaatttgaatgtaagcagagagttttggggt
tgtaaactgaatgagaatttttatcaagactcgaagtattctttgcgaattaggttatgc
aatgtagacgagtttttgggtcgtatgaggttaggccattggcctgtgttacctgctagt
gatatatatttagaattcgtggagaagagcatacaggatgaagcagtgatagtgttcggg
ggatttgacggaccggatgagggtgtcaccgctctcgttcaccttgccaatcttaagttt
ttgacattgaggccagttctcggtgttactttttcagaggaaacgccatctctgagggtg
agagtggagatgcttaagggcgcattcgatgcatgtgactctcttcttgacactacgagg
caactttggaagaaaagtttgatgaatgtaatgtcttgggtgcggcctgaagtcatgact
tcagaggctagatatggatgttacgagtcagctggggtagagttcggtttacatgaggag
atggacagagatgcctggagctcgaggaaacaggccaggtttgatgctgctggattttat
gaagccatcaagccatcgaaagagaatcccatgcttgaagataatatacctgacctactt
cccaagcttagaccatatcaacgccgagcagcatattggatggtacagagagaaaaaggg
gcatctgaatgttcaagtgccagtgaaagaagtcaattcttgtctgctctgtgtgtgcca
ctgaatttaattgacacatgttcgacagtgttttacaatccatttagtggtaatgtttca
ttgcatccagaaagatcttcctcacatgtctttggtggtattcttgctgatgaaatggga
ctgggaaaaacagttgagctgcttgcttgtatctttgctcatcggaagccatcatctgaa
gctgggaatggtattgatgatatgattcaaatggctgaggatcagaaagctaacctgaaa
agattgaaaagagagcgcatcgagtgcatatgtggagctgtcagtgaaagctctaagtat
aaaggattatgggtgcaatgtgatatatgtgatgcttggcagcatgcagattgtgtgggc
tattcaactagaggaaaaacttcaaaatccagagaagcctctaaaggacaaggctgtaaa
aataaacaaacagaaaattcaggaaaacgtgctagaagaaacaatgacgccaaaatagtt
gacatggacggggattatatctgccagctatgctctgaactgattcaggctactcatgct
ccgattgctactggtgcatctcttatagtttgcccagctcctatattgcaacagtggcat
gctgaaattattcgtcacacaaatccaggttccttgaaaacttgtgtttatgaaggtgtt
cggaacagaccactttcaaatccatcattgatggacattagtgagcttgtcaatgccgat
atagttttaacaacttatgatgtgcttaaagatgatttatcgcatgacactgataggcac
gaaggggaccgtcggattatgagatttcagaagagataccccgtgctcccaactttcctc
accagaatatactggtggagagtttgtttggatgaggctcaaatggtggagagcagtgtt
actgctgcaacagaaatggcactgcggcttcatacgaagcatcggtggtgtatttccgga
acccctattcaacgaaatcttgatgacttatatgggctcttgaggttccttaaagcttgt
ccatttgatgttcagaagtggtggattgaagttatacgagatccatatgagaggggagac
atagaagctatgcaattcactcataaattctttaagcaaataatgtggcgttcttcaaaa
ggacatgttgcagatgaattgcagcttcctccccaagaggagtccctcacttggctctct
ttttccccaattgaagagcatttctatcagaggcagcatgaaacttgtgtgagctatgct
cgagaagtaattgaaggtttcaaagatgacattctcaaacaaaaagtcacaggttccatg
ctatctgatgctacatttgatcctttcatcacccaagtggaggctgcaaaactgttgaac
tcactcttgaagcttcggcaagcctgctgtcatcctcaagtgggaagctctggattgcgt
tctttacaacaatctcccatgaccatggatgagatactatcagttcttataggcaagacc
aaggtggaaggggaggaagctctcaggaaattagttgttgcattgaatgggctagcagga
attgccgtaatcaaacaagacttttcgccagcagcatcactttacagagaagcactaggt
ttagccaaggagcattcagaagatttccgaatggaccctttattaaacattcatattcat
cataatcttgctgagatactcccattgacttcagattacttgcaacatttagattcaaat
gagcaacctcctgaaagctcaaaacgcaaggcctccagtgtttctaattatgaagattgt
gttcaatttgatggaaagagatcaaagttaagtggagaagactcagattgcgcatttact
gctgagaatttacccaggtttgcatctggcccactcactcatgttaaagaatgtgaccag
aaggcccatagagattccaaaacttttgatgatggatatttgaggacagcatgtgagaat
ctgaaagagaagttcttgtctgtgttcaattcaaagttgtccctggcccagcaagagttc
agaaagtcacatctccaggtttgtaaggcatttgatgatagaaagaatcaggatatttgg
tggttggaagctcttcatcacattgagcagaataaggattcctcaagtgagttgatcaga
aagattggagaagctatctccagtaaattaaatgtttctaggacctcaaaaattgcttcc
tgctttcgaagcataactgctctgaagtattacatccagactggtttggattcactagaa
gattctaggaaaactttgcttgatagacttgtggaaattgacaagacaatggaaaatcca
agagaggaggacattgagcgtgtgagatactgcccgaactgccaacctaatgtagatggt
cttatatgtgttcattgtgagctagatgaattatttcaggtctatgaggctaggctcttt
cgtcttaacaaagctcatgatggagggttcattatatccgttgaggaggcagtggagcag
caaaaaaggaagtctgctctgaaccgtttttattgggctttgtcgaggcctgataaaaat
tcaacttcatccagtgcacaatatgaagataatcatgtagggaagagggatgttggggaa
aaagtagtggtctcaagatctccatccgaactggaagttgttcttgggattgtaaagaac
ttctccaaggctctgttaggtcgagatggtactgaaacagcgagcaaacagctaatgctt
cttgagggcatgcgtaaggaatatgcacaagcaagatccttagcaatagcacaagctcaa
gttctgcgtgctcatgatgaaataaagatggcaacctcacggttgcgccttcgggagaat
gatgacgataaatccatcgatgccttaagtctaggagaactggaagcagctagtgttgaa
aattctagtgataagttcctagctttgaccaccttatcacgtataaaaggccaacttcgc
tatctcaagggtttgatacaatctaaacaaaagatgcaagtagagaatacaaattgtcca
tccttagatgaagttgcaatggtctcttccagttctactactgaagaggaaacgggttca
gtagttaaagctgatgaagaaacatgcccagtttgtcaagaaaagctccaaaaccaaaag
atggtttttcaatgtggccatattacttgctgtaaatgtttatttgcaatgacagagcaa
agattcaatcatcatggaaagttacatcataaatgggtgatgtgcccaacctgccgacaa
catactgattttggaaatattgcttttgctgatgatggacaaaataagtcagacagtgct
ccccagggttgtgaaaacattgaagcttgtgttactgttcatggttcatatggaacaaag
attgaagcaatcacgaagagaatcctgtggatcagttctacagatccaagggcaaaactt
cttgttttctccagttggaatgatgtccttgatgtgttggaacatgcattcacagctaac
agcataagttacatcaggatgaaaggaggcaggaaggcccaatttgccatcagtcacttc
aaaggacagagctgtgtcaaaggaataggtaaggtgcataaccagcaagcagaaaccagc
tctgttagggtgttactgttattaattcaacatggagccaatggcctcaatcttttggaa
gcacagcatgttattcttgtagagccactactcaacccagcagctgaagcacaagctgtt
ggtcgggtccaccgcattggacaggagaacaagacaattgttcatcgcttcatagtgaaa
aatacagttgaagaaagtatatataaactcaacagaagcagggctatgagttcgtacatc
agtggaaacacaaaaaatcaagatcaacttgtcttgacacttaaagatgtggagtctcta
tttgcggccacaccctcaactgtaccagaaaccgatgaaaagccaactggaagcttgatg
catttgccgcctgccgtagccgctgccatagctgccgagaagagactaaaggagcagact
ggaaagccaagttga
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integrated database retrieval system
