Diospyros lotus (date-plum): 127807376
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Entry
127807376 CDS
T10632
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03430
Mismatch repair
dlt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127807376
03460 Fanconi anemia pathway
127807376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127807376
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
127807376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
127807376
NCBI-ProteinID:
XP_052201129
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Position
8:12436965..12524054
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AA seq
751 aa
AA seq
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MESEEDQMEEPIPAIALPVVTEPPKIHRLHESVVNRIAAGEVIQRPHSAVKELVENSLDA
ASTSINVVVKDGGLKLIQVSDDGHGIRDIGTLRKMQYEDLPILCERHTTSKLSRFEDLQS
IKSMGFRGEALASMTYVGHVAVTTITKGQLHGYRVSYRDGVMEHEPKPCAAVKGTQIMIE
NLFYNMTARRKTLQNSADDYPKIVDLLSRFAIHHINVSFSCRKHGAARADVHSVATASRL
DAIRAVYGVSVARNLMKIEVSDDDPSSSVFEMDGFISNSNYTSRKTTMVLFINDRLVECS
ALKRAIEIVYAATLPKASKPFIYMSVILPPMHVDVNVHPTKREVSLLNQEIIIEKMQSAV
ESKLRSTNEAMLFQEKVVDPTSSSPVATTKDSSMNASASGMKGIKSQKVPVNKMVRTDSQ
DPAGRLHAYLQVKPPSNYEQSSSLTSVRSSIRQRRNPKESSDLTSIEELIDDIEKNCHSV
LLDIVRHCTYIGMADDVFALLQHNTQLYLANVVNLSKELMYQQVLRRFAHFNAIQLSDPA
PLLELITMALKEEDLDPECNEKDELKEKIAEMNTELLKTKTEMLEEYFCIYVDSDGNLSR
LPVILDQYTPDMDRLPEFLLCLGNDVDWEDEKSCLQSIAAALGNFYAMHPPLLPNPSGDG
LEFYKRRKSSGSPHAEENISKDAEDHVTNDGIEHELVAEAENSWAQREWSIQHVLFPSMR
LFLKPPTSLAANGTFVQVASLEKLYKIFERC
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgaagaggatcaaatggaagaacccattcctgccattgcgttacctgtagtc
acagagcccccgaagatccaccgcctccacgagtccgtcgtgaaccggatcgccgccggc
gaagtcatccagcggccgcactctgccgtcaaggagcttgtcgagaacagcctcgacgcc
gcctccacctccatcaatgtcgtcgtcaaggacggcggcctcaaactcatccaagtctcc
gacgatggccacggcatcagagatattggtactctgcgcaaaatgcagtatgaggacttg
ccgatactgtgcgagaggcacacgacgtcaaagttgtctaggtttgaagatttgcagtcg
attaaatcgatggggttccgtggagaggccttggccagcatgacctacgtgggtcatgtt
gctgtgaccaccattaccaaagggcaattgcatggttacagggtatcatacagagatggt
gtgatggagcatgaacctaaaccttgcgcggctgttaagggcacacaaataatgattgag
aatttattctataacatgactgctcggagaaaaacacttcagaactctgctgatgattat
ccaaaaattgtagatttactaagccgatttgcaattcatcacataaatgtgagcttctct
tgcagaaagcatggagctgctagggcagatgttcactcagttgccactgcctcaaggctt
gatgcaattagagctgtttatggggtgtcagttgcacgaaatctgatgaaaatagaagtg
tctgatgatgatccctcaagttcagtttttgagatggatggttttatctccaactctaat
tacacttcaagaaaaacaacgatggtgctttttataaatgatagattagttgagtgcagt
gctttaaagagggcaattgaaattgtttatgctgcaaccttacccaaagcatcgaagccc
ttcatatacatgtcagttatattgccacctatgcatgttgatgtgaatgtgcatccaaca
aagagagaggtaagccttttgaatcaagaaattattattgaaaagatgcagtctgcagta
gagtcaaaattaaggagcaccaatgaggcaatgttgttccaagaaaaggtggtagatccc
acttcatcgagtcctgtggctacaaccaaagattcctcaatgaatgcctcagcttctggc
atgaaggggataaaatcgcaaaaagttccagtcaacaaaatggtacgaacagattctcag
gatcctgctggaagactgcatgcctacttgcaagttaagcctcctagcaattatgagcag
agttctagtttgacatctgtgaggtcatctatccgacaaaggaggaatccaaaggaatct
tcagatctcactagcattgaggaacttattgatgacattgaaaaaaattgtcattctgtt
ctactggacattgtgagacactgcacatatattgggatggcagatgatgtgtttgctttg
cttcaacataatactcagttgtatcttgccaatgtagtgaacttgagcaaagagctcatg
tatcagcaagtcctgcgtcggtttgctcactttaatgcaatacaattaagcgacccagct
ccactgctggagttgattacgatggcactgaaagaggaggatttagaccctgaatgcaat
gagaaggatgagctaaaagaaaagattgcagaaatgaacacagagctgctcaagacgaaa
actgagatgctagaggaatatttctgtatttatgttgattcagatggtaacctgtctagg
cttcctgtgattcttgaccagtatacacctgatatggaccggctcccagaatttttactt
tgtttgggcaatgatgtcgactgggaggatgagaaaagttgcttacaatcaattgccgct
gctcttggaaacttctatgccatgcatccacctctgctaccaaacccatcaggtgatggt
ttggaattctacaagaggagaaaatcatctggcagtccacatgcagaagaaaatatctct
aaagatgctgaggatcatgtaacgaatgacggcattgagcacgaactagttgctgaagct
gagaattcctgggctcagcgcgaatggtcaatccaacatgtcttgtttccttccatgaga
cttttcttgaagccaccaacttcattggctgcaaatggaacattcgtccaggttgcttcc
ctggagaaactttacaagatttttgagagatgctaa
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