Diospyros lotus (date-plum): 127807497
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Entry
127807497 CDS
T10632
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dlt04131
]
127807497
04121 Ubiquitin system [BR:
dlt04121
]
127807497
Enzymes [BR:
dlt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127807497
Membrane trafficking [BR:
dlt04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127807497
Ubiquitin system [BR:
dlt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127807497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Zn_ribbon_6
zf-Nse
DUF7560
CxC4
Motif
Other DBs
NCBI-GeneID:
127807497
NCBI-ProteinID:
XP_052201345
LinkDB
All DBs
Position
8:complement(7585776..7588201)
Genome browser
AA seq
358 aa
AA seq
DB search
MFGCIHPYNICRERERERESKLGFFEGFEIAIMSLSVPRQTTDANRNFQLYWCYHCHRTV
RLAPQNPSEIICPRCFGEFLYEIDLVRPDPLLEFTQFDPSPEARFLEVLSIMLDPLTRTR
NRVLDTREDHPLIDARFRAPRRRNRLSDERAEGGSRGWQWPWHRNRVFDLTDDEWTPESG
ILARPRRWILVPGGRNAEQENLMPSGVNPRDYFAGPGLSELIEQLTQNDRQGPAPAPDSA
INALPTVKITPNHLASDSLCPVCKEEFEVGGEARELPCNHIYHSDCIVPWLRLHNSCPVC
RHEVQVAVNVGARAESSDDDGRNRRCMRLRQLASLWPFRSRYRPPNHGADGSRSCLIL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgttcggatgcatccatccatataatatatgcagagagagagagagagagagagagagc
aaacttggattctttgaaggcttcgagatcgcaatcatgtcgctgagcgttcctcgacaa
acaaccgacgccaacaggaacttccagctgtactggtgctatcactgccaccggacggtc
aggttggccccccagaacccgtccgagatcatctgtccccgttgcttcggtgagttcctt
tacgagatcgaccttgtcaggcccgatcccctcctcgagttcactcaattcgatccctcc
ccagaagcccgctttctcgaagtcctatctatcatgttggatcccctgacccgcacgaga
aatcgagtccttgacacgagagaagatcatcctttaatagacgcaagattccgtgcgcca
aggcggcgaaatcgtttatctgatgagagagcggaaggcggcagccggggctggcagtgg
ccgtggcaccgaaaccgggttttcgacttaacggacgatgaatggacgccggaaagcggg
attctggcccgccccaggcgctggattttggtgccaggcggacgaaatgccgagcaggaa
aacttgatgccttcaggggtcaatcctcgggattactttgcagggccagggctaagcgag
ctgattgaacaactgactcaaaatgacagacagggtcctgccccagcgccagactccgcc
ataaacgctcttcccaccgtgaagatcacgccgaaccatctggctagcgattcgctttgc
ccggtttgcaaggaggagttcgaagttggtggggaagcgagggagcttccttgcaaccac
atatatcattctgattgcattgttccatggttgaggcttcacaattcttgcccagtatgc
cgccacgaggtgcaggtggcggtcaacgtcggagctcgggctgagtcgtctgatgatgac
ggtaggaacaggcggtgcatgaggctgagacaactggcttctttgtggccctttcgctcg
aggtatcgaccacccaaccatggagctgatggatcgagatcttgccttattctatag
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