Diospyros lotus (date-plum): 127807519
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Entry
127807519 CDS
T10632
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
dlt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127807519
Chromosome and associated proteins [BR:
dlt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127807519
PBAF complex
127807519
GBAF(ncBAF) complex
127807519
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127807519
NCBI-ProteinID:
XP_052201382
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Position
8:complement(6765377..6780318)
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AA seq
796 aa
AA seq
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MPASSSAEARTRWRKKRKREAPIGRRPKPQDDDVDDDEEEEEDLDQQQQQQQHELDDDQQ
PQQNPHPGSDPGPTARESEVLSDGGVRISDFPPVVKHTVNRPHSSVLAIVALERSIRCGE
GKAVQNGVVLENVSHGQLQARSAVPADSPVLLAAAGDSERAEGSSSAYVITPPPIMEGRG
VVKRFGSNAVHVVPMHSDWFSPNTVHRLERQVVPHFFSGKSVDHTPEKYMECRNRLVAKY
MENPDTRLSAADCQGLVAGIDNDDLTRIVRFLDHWGIINYCAAAPNCAHQSDGLNLREDS
SGEVHVPSTALKSIDSLIHFDKPRCRLKAADVYPSLSCHESKESDLDRRIRERLSENRCN
YCSSPLPFVYYQSQKEVDSVLCLDCFHDGKFVTGHSSLDFVRFDTTKDYGDLDGESWTDQ
ETLLLLEAMEMYKENWNEIAEHVGTKSKAQCILHFIRLPMEDRPLENIEIPNVPLSSNLL
NRDDSGRSQLNSNGDSAGYWPQDPDSESRLPFSNSANPVMALVAFLASAVGPRVAAACAH
ASLEVLSEDSQKASGHGNRMNLESWHDNEGSSHAGNPNTNQRKEDNSRVQSQFNQNGEVT
PLSAEKVRCAAKAGLSAASTKAKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEVET
LLMKECEHVERARQRIAADRTRIMSTQFGTGGVTSPMNMQGGNPTAVNNTGNNRQPVITG
SSSQPFISGYGNNQPVHPQFMARQPMYGLGPRLPLSALHPSSSPSPNAMFSAAANAQSTL
NHPMLRPVSGSGPGPG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcgtcctcagcggaggcaaggacaaggtggaggaagaagcggaagagggag
gccccaattgggcgacgccccaagccccaagacgacgacgtcgatgacgatgaggaggag
gaggaggacctcgatcaacagcagcagcagcagcagcacgaattggatgacgatcaacag
ccgcagcaaaaccctcaccccggttccgatccgggtccgactgcgcgggagagcgaagtc
ttatcggacggcggggttcgaatctccgacttcccgccggtggtcaagcacaccgtgaat
cgtcctcactcgtcggtgctcgcgattgtcgcgctggagaggtcgattcggtgcggggag
ggcaaggctgtgcagaacggcgtcgttctggagaacgtgtcgcacgggcagctccaggcg
cggtctgccgtgccggccgatagtccggtgctgttggcggcggctggggattccgagaga
gcggaggggtcttcttcggcgtatgtgattacgccgcctcccattatggaaggtcgtgga
gttgtgaagcgttttgggagtaacgcagttcatgttgtgccaatgcactcagattggttt
tcacctaatacagtccacagattggagagacaagtagtcccacatttcttctctgggaag
tcagttgaccatacacctgaaaagtatatggaatgtcggaatcgcttagttgccaagtac
atggaaaacccagatacaagactctctgctgctgattgccaaggattggtagctggtatt
gataatgatgatttaactcgaattgttaggtttcttgatcattggggaattattaactac
tgtgctgctgcccccaattgtgcacatcagagtgatggtttgaatttaagagaggattcc
tctggtgaggttcatgtgccatcaactgctttgaagtccattgatagtttaattcacttt
gacaagcctagatgtaggctgaaagcagcagatgtatacccatcattgtcatgtcatgaa
agcaaagagtctgatttagacagaagaatcagagagcgactatctgaaaatcgatgcaac
tattgttcctctcctctaccctttgtctactatcagtcgcagaaggaggttgattcagtg
ctatgcttggactgtttccatgatggaaaatttgttacaggccattcaagcttagacttt
gtaaggtttgatactactaaagattatggtgatctggatggggaaagttggactgatcag
gaaacactactgctgcttgaagctatggagatgtacaaggagaactggaatgaaatagcc
gagcatgttggtactaagtcaaaagcacagtgcatccttcattttatccgtcttccaatg
gaggaccgccctttggaaaatattgagattccaaacgtgcccctctcctcaaatttgtta
aatagagatgattctggaagatcacaattaaattcaaatggagattcagcaggatattgg
ccccaagacccagattcagagagtaggcttcctttttcaaattctgctaacccagttatg
gccttggttgcctttctggcatctgctgtgggaccaagagttgctgcggcttgtgcccat
gcatccttggaagtactgtctgaggattctcagaaggcatctgggcatggtaataggatg
aatttggagagttggcatgacaatgaaggcagttctcacgccggaaatccaaacacaaat
cagagaaaagaagataactccagagtacaaagtcaatttaatcagaatggtgaggtcact
ccattatctgctgaaaaggtgagatgtgcggccaaagctggtctttctgctgcatcaaca
aaagcaaaactgtttgcagatcatgaagagcgtgaaattcaaaggctgtctgcaaatatt
gtaaaccatcagttgaagagattagagcttaagctgaagcaatttgcagaggtggaaaca
ctgttaatgaaggaatgtgaacatgtagagagggcaaggcagaggattgctgctgaccgg
acccgcataatgtcaactcagtttggcactggaggagtgacttcacccatgaacatgcag
ggcggtaatccaacggcggttaataacactggcaataaccggcaaccagtcataacgggc
tcatcctcacagccattcatttctgggtatggcaacaatcagccagtccatccccaattc
atggcacgtcaacctatgtatggacttggaccacggctgccactttcagcgttacaccca
tcctcatctccttctcctaatgctatgttcagtgcagcagcaaatgcccagtccactctc
aatcatccaatgctgaggcctgtatcaggcagtggccccggtccgggttaa
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