Diospyros lotus (date-plum): 127807522
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Entry
127807522 CDS
T10632
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127807522
03009 Ribosome biogenesis [BR:
dlt03009
]
127807522
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127807522
Spliceosome [BR:
dlt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127807522
Ribosome biogenesis [BR:
dlt03009
]
Eukaryotic type
Pre-60S particles
Helicases
127807522
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ARTD15_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
127807522
NCBI-ProteinID:
XP_052201387
LinkDB
All DBs
Position
8:30964040..31008107
Genome browser
AA seq
736 aa
AA seq
DB search
MEESSFQFEPPSDEELEHGHDEHEEEDEEDKEQETLGHRKTQSPWDFASYSESVEQEHAR
RSTTSIDFKISKALQQCPTPTAIAALGEDGSDSEPDRQEDYRPEDGDDAANATGGDCKSF
FASSEGASFHANSFLELNLSRPLLRACETLGYAKPTPIQAACIPLALTGRDICGSAITGS
GKTAAFALPTLERLLYRPKRAPAIRVLILTPTRELAVQVHSMVQKLAQFTDIRCCLVVGG
LSTKTQEAALRSMPDVVVATPGRMIDHLRNSMSIDLDDLAVLILDEADRLLELGFNAEIN
ELVRLCPKRRQTMLFSATMTEEVDELIKLSLTRPLRLSADPSAKRPATLIEEVVRIRRMR
EVNQEAVLLALCSKTFTSKVIIFSGTKQAAHRLKILFGLAGFKASELHGNLTQAQRLDAL
ELFRKQQVDFLIATDVAARGLDIIGVQTVVNFACPRDLTSYVHRVGRTARAGREGYAVTL
LTDNDRSLLKAIAKRAGSKLKSRIVAEQSVTKWSQIIEQMEDQVAAILQEEREEMALRKA
EMEATKAENMIAHRDEIFSRPKRTWFVTEKEKKLVAKAAKASVGNGKGSETEVVSAQQAE
DLKMKEKRKREREKNLPRKKRRKLEAAREQLEDENDNVESEGTGKGKKDKAGISLVDLAY
RRAKAAKAVKKLADAGKIVKTKSQKTKRLSKVNQSRTEEMKEMFQSDMSEKKQKRNLRGG
GKKKSSFKSKSRYKRR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagcagctttcaattcgagccgccaagcgacgaagaactggagcatggccac
gacgaacacgaagaagaagacgaagaggacaaagagcaagaaacactaggccatcgcaaa
acgcaatcgccatgggactttgcttcctactccgaatcagtggagcaagagcacgcccgc
cggagcactacttcgatcgattttaagatctcgaaggcgctccagcaatgccccacgcca
accgccatcgccgccctgggcgaagacggctccgattccgaaccggaccgccaagaggat
tatagaccagaggacggtgatgatgcggccaacgctaccggcggcgactgtaagtcgttc
tttgcgtcctcagaaggagcttccttccacgcgaattcattcctggagcttaatctgtct
aggccactgcttcgagcttgcgaaactttgggctatgctaagcctacaccaattcaggca
gcttgtataccgctcgcattaacagggcgtgatatatgtgggagtgctattactggttct
ggaaagactgctgcttttgccttgcctactctggagagattattgtaccgtccaaaacgt
gctccagctattagggttcttatccttactccaacgagggagttagctgtgcaggttcat
agcatggtacagaaacttgctcaatttactgacataagatgctgtctggtagtaggtgga
ttatcaacaaagacgcaagaggctgcattgaggtcgatgccagatgttgttgtggcaact
ccaggacgtatgatagatcatttgcgcaattctatgtctatagatttggatgatcttgca
gttctgatccttgatgaggcagatcgccttctagagcttggatttaatgctgaaattaat
gagctggttagactttgccctaaacggagacagaccatgctgttttctgctactatgaca
gaagaagttgacgaacttatcaagctttccctgacccggccactgcgcctctctgctgat
ccttctgcaaaaagaccagcaacattgattgaggaggtggtgaggatacgccgaatgcgt
gaagtgaatcaagaggcggttcttcttgctctgtgctccaagactttcacatccaaagtg
ataattttcagtggaacaaagcaagctgcgcatagattgaagattttgtttggattggct
gggttcaaagcttctgaattgcacggaaatcttactcaagcccagcgtcttgatgcattg
gaacttttcaggaagcagcaagtcgattttctgattgcaactgatgttgctgctcgtgga
ctcgacattattggtgttcaaacagttgtaaactttgcatgtccccgggaccttacgagt
tatgttcatcgagtaggtcgcacagcaagagctggtagagaaggatatgctgttacattg
ctcacagataatgatcggtctctcttgaaagccattgcaaagagagctggttcaaagctg
aagagccggattgttgcagagcaatctgtaacaaaatggtctcaaataattgagcaaatg
gaagatcaagtggctgcaattcttcaggaagagagggaagagatggccctaagaaaagcg
gaaatggaggctacgaaggcagaaaatatgattgcgcatagagatgaaatcttttcacgc
cctaaaaggacctggtttgtaacagaaaaggagaaaaaacttgtagctaaggcagcaaag
gcatctgttggaaatggtaaaggctctgaaactgaggttgttagtgcccagcaagctgaa
gaccttaagatgaaggaaaagagaaagcgggagcgagagaaaaatcttccaagaaagaag
aggaggaaacttgaagctgctagggagcaattggaagatgaaaatgacaatgtagagtca
gaaggtactggcaaaggtaagaaagataaagctggcatttcccttgttgacctagcttat
cgacgggcaaaggctgcaaaggctgtgaagaagttggcagacgctggcaagattgttaaa
acaaagagccaaaaaacaaaacgtctttcaaaagtaaatcagtcaaggacagaggagatg
aaggaaatgtttcagagtgatatgagtgagaagaagcaaaaaagaaacctccgaggaggt
ggaaagaaaaaatcctcatttaagagcaagtcaaggtacaagcggagatag
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