Diospyros lotus (date-plum): 127807524
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Entry
127807524 CDS
T10632
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127807524
Spliceosome [BR:
dlt03041
]
Complex B
Other components
Complex B specific factors
127807524
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
LisH_TPL
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_SCAP
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
DUF7165
Beta-prop_HPS5
Beta-prop_WDR75_2nd
VPS8_N
Beta-prop_LRRK2
PROPPIN
Beta-prop_IFT122_2nd
Beta-prop_IP5PC_F
zf_topless
Motif
Other DBs
NCBI-GeneID:
127807524
NCBI-ProteinID:
XP_052201392
LinkDB
All DBs
Position
8:complement(13642360..13752614)
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AA seq
513 aa
AA seq
DB search
MSTLEIEARDVIKIVLQFCKENSLHQTFQILQNECQVSLNTVDSLETFVADINSGRWDAI
LPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDMYPTTLGHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIEV
WDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSLVFSRDGSQLLSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTSD
GARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSVHLFPKTTDHIIVCNKTS
SIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGEDRNIYCFSHQSGKLEYLM
KVHEKDVIGITHHPHRNLVATYSEDCTMKLWKP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgttagaaatcgaagcccgagacgtgattaagatagttcttcagttttgcaaa
gaaaattctttgcatcaaactttccaaatattgcagaatgagtgccaggtttctctgaat
acagttgacagccttgaaacatttgttgctgatattaacagtggaaggtgggatgcaata
ttaccccaagtggcacaacttaagcttcctagaaagaagctagaagatctgtatgaacag
attgttttggaaatgattgaacttcgggaacttgatactgcacgggccatattaaggcaa
acccaggtaatgggtgtcatgaagcaagagcaacctgaaagatacttgagacttgagcat
ctacttgttcgaacttattttgatccacatgaggcttatcaagattccacaaaagagaaa
aggcgagcacaaatagctcaagctcttgctgcagaggtttctgtcgttcctccgtcacga
ctaatggctctaattggtcaggctttgaagtggcagcagcatcaagggttgcttccgcca
gggacacagtttgacttgtttcgagggacagctgccatgaaacaagatgttgatgatatg
tatccaacaactctggggcatacaatcaagtttggaaaaaaaagtcatcctgaatgtgct
aggttctcaccggatggacagtttcttgtttcttgctctgttgacggatttattgaggtc
tgggaccacataagtgggaaactaaagaaggaccttcagtaccaagctgatgaaacattt
atgatgcatgatgatgcagtgctttgtgttgattttagtagggattctgagatgctggca
tctggatcccaagatgggaaaatcaaagtttggcgcataagaactggtcagtgcttgcgc
cgtcttgaacgtgcgcattcccagggtgtcaccagtcttgttttctctcgggatggaagt
cagctactaagcacatcttttgacagcactgcaagaatccatggcctgaagtcagggaaa
ttattaaaggaatttcgtgggcatagttcctatgtaaatgatgctatctttactagtgat
ggagcccgtgtcattactgcatccagcgactgcactgtcaaagtttgggatgtgaagact
acagactgtctgcacacatttaagccaccacctcctttaagggggggcgatgcatctgtg
aattctgttcatctgttccctaaaaccacagatcacataatcgtatgtaacaagacgtca
tcaatatacctcatgacccttcaaggacaggtcgtaaagagcttctcgtctggtaaaaga
gaaggtggcgatttcgttgcagcttgtgtatcacccaaaggggagtggatttactgcatt
ggtgaagatagaaatatatactgcttcagccaccaatctggtaaactggagtacttaatg
aaggtacacgagaaggatgtaattgggatcactcaccatccacacagaaaccttgttgct
acatacagtgaagactgcacgatgaaattgtggaagccttga
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