Diospyros lotus (date-plum): 127807906
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Entry
127807906 CDS
T10632
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127807906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127807906
Spliceosome [BR:
dlt03041
]
Common components
Common spliceosomal components
SR proteins
127807906
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
127807906
NCBI-ProteinID:
XP_052202085
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All DBs
Position
8:2696795..2702716
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AA seq
256 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVEKLDGRVVDGREIMVQFAKYGPNAERIHKGRILEPVSRSKGRSRSR
SPRPRYRDEYKDKDYRRRSRSRSRGKYDRDRQRGRERDYRHRSRSRSVSPDYRKDRGRAR
YDDERRSPSRSYGSASPARRSPSPQRSPSPRRTPPSRNRSPDSRNGEERSHSPKDISPQG
RPADSRSPSPRSDADE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaagatctggtcctccagacatcagagacacctattcgctcctcgtt
ctcaacatcactttccgaaccactgcagatgatttgttccccctcttcgagaagtatggc
aaggtggtcgatgtcttcatcccgagagaccggaggactggtgattcgcgtggttttgcg
tttgttcggtacaagtatgccgacgaagctcagaaggcggtcgaaaagctagatgggaga
gttgttgatggcagagagataatggttcaatttgctaagtatggacctaatgctgaacga
attcataaagggagaatactagagcccgtatcaaggtcaaaaggtaggtcaagaagccgg
agtcctcgaccaaggtatagggatgaatacaaagacaaagattacaggaggagaagtcgc
agcagaagtaggggtaagtatgaccgtgaccggcagcgtggaagggaaagagattatcgt
catcggagtaggagccgcagtgtaagtcctgattatcgcaaagaccgtgggagagcgagg
tatgatgatgagaggcgcagtccaagtcggtcttatggaagtgcctcccctgctcgtcgt
agccccagtcctcagaggagcccctctccacgtaggacacctccatctaggaatcggagt
cctgattctcgcaatggtgaagaacgttcacatagtcccaaagatatttcgccgcaaggc
agacctgctgattcccggagcccctctccacgttctgatgctgatgagtaa
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