Diospyros lotus (date-plum): 127808030
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Entry
127808030 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127808030 isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03440
Homologous recombination
dlt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127808030
03460 Fanconi anemia pathway
127808030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlt03400
]
127808030
Enzymes [BR:
dlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127808030
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
127808030
FA (Fanconi anemia) pathway
Downstream FA components
127808030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Pex19
Motif
Other DBs
NCBI-GeneID:
127808030
NCBI-ProteinID:
XP_052202293
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All DBs
Position
8:complement(33139266..33191135)
Genome browser
AA seq
1281 aa
AA seq
DB search
MERSNPARKSKNVHHIGGIAVEFPYQPYGSQLAFMAKVISTLDRALRDGHSHALLESPTG
TGKSLSLLCSVLAWQQSYPSRKIASSPAISKPAPEAMTDPLAYGGGFIPESQPSAPGNPD
PAPPATNNKASKKKTTPTIFYASRTHSQIAQVIREYKKTTYRVPMAVLASRKHYCTNRHV
NGKKNIDEECKLLLSNREVGCSEFKNANKVKGHSSLKKGGCHEVYDIEDLVKIGQEMKGC
SYFAARSMADDAQLVFCPYSYIINPLIRKAMEVDIKGAILILDEAHNIEDMAREAGSMDA
EEDALHKLQTELGELAVNDAMTYQPLYEMIQDLVSWIERRKNTLEKHEFQHYFSCWTGDK
ALRELHEANISQQCFPILQECATKAIKIASDAEPEVAHLTSMSAMALAGLFSSLNYFFSG
NGVHVYDYQLVLRRYIKKDAGQMHSLSLWCLNPAVVFRDIANLSLSVILTSGTLSPMNSF
SSELGVQFGTCLEAPHVIDVESQLWAAVISTGPGNYRLNASYKTADAYAFQDALGTALEK
ICKIVPGGSLIFFPSYKLMEKLCKRWHATGQWSRLNAQKSLFVEPMGGSQDDFEHVLRDY
YNTICQSKRPAVGKKRRGKRLGLSNCYPDDCTENCKEGAAFLAVCRGKVSEGIDFSDENA
RVVIIVGIPFPNINDIQVVQKKRYNDTYKSSRHLLSGNEWYCQQAFRALNQAAGRCIRHR
FDYGAVILLDERFREERNTTYISKWLRKSIRQYDNFENSLEELKSFFRTVKQERLGKDAV
NTTNNLDVNVESTAAVDRGKGFVNKNKKLNKSNEHGPKLVSESIISMEKSTRLSQCPTPV
TTNCVTFILSESEDNVEVQELLIVDEKDVTSSRECVDLDCSFQKDLGYPRALSMEFSSDD
PEISIVRETPSMNVSPLASPRSFSKDENSNSTIIEAPGKIQDQLLLHSRSPTYSNAAHSK
STSSLVVTPEKYVSANMNSHLGETESVLNLSVNSHTQKRRKPSGLKSVNLMQVEQFDVPD
PRVTGHSSSMASSMITKAENCRDKFVFETSCSPNELTMPSVTQLLTGNNAWVSCTASGHV
MNKRLQIFCSCCRNPLGLPQNHLYIRCSITSLSKVHLTTLLKGRSEAAAENISTSIPVVI
SDISSVDQRLCDITPDSVPGQGIWCREDGCVFNAIFCPFCSKPNNCLGVQVMATDTSNVQ
LLDKILFYLDRLEIKNPDASEDKDLSPACSSGFTSGAFPISIEKFSYIPPQQHSGGWRTT
KSKMQLPKRQLLPTSGGRGGT
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctcaaatccagcaagaaaatcgaaaaacgtgcaccacattggaggaatcgct
gtggaatttccctaccaaccctacggatcgcagctagctttcatggccaaggtcatctca
accctcgatcgagccctaagggacggccactcccacgccttgctcgaatcccccaccggc
accggaaaatcgctctcgctcctttgctcggttctcgcgtggcagcagagctatccctcc
agaaagattgcctccagtcctgctatctcgaagcctgctcccgaggccatgactgatccc
cttgcttacggaggcggatttatccccgaatcccagccttcagctccaggaaatccagat
ccagctccaccagcaacaaacaacaaggcctcgaagaaaaagacaacacccaccattttt
tatgcctcgagaacacactcacaaattgctcaggtgattcgtgaatacaagaagactact
tatcgggtaccaatggcagtgctggcgtcaaggaagcattactgtaccaataggcatgta
aatggcaaaaaaaatatcgacgaagaatgcaagttgcttctaagcaatcgagaagtagga
tgttcagaattcaaaaatgcaaacaaagtcaaaggtcattcatctcttaagaaaggaggt
tgccatgaagtctatgacattgaagatctagtgaaaattgggcaagaaatgaaaggttgc
tcctattttgctgcacgttccatggcagatgatgcacaattagttttttgcccatacagc
tacatcattaatcctctcatccgcaaagcaatggaagtggatattaaaggggcaattcta
attcttgatgaagcacataatatagaagacatggctcgtgaggcaggtagcatggatgct
gaagaagatgctttgcataaactgcagactgaattaggggaattggctgttaatgatgca
atgacttaccaacctttgtatgaaatgatacaggatttagtcagttggatagaacggagg
aaaaatacattggaaaagcatgaatttcagcattatttctcatgttggactggagataag
gctttaagagagctccatgaagcaaacatttcacaacaatgcttccctatattgcaagag
tgtgccacaaaggcaatcaaaattgcttcagatgcagagccagaagtagctcatttaacc
agcatgtcagccatggcactggcaggattgttttcttcactcaattactttttttcggga
aatggggtccacgtatatgactatcagcttgtattacggcgatatattaagaaagatgct
ggccagatgcatagtttgagtttatggtgcttgaatccagctgttgtcttcagagatatt
gctaatctttctttatcagtgatcctgacgtccgggacactatcgcctatgaattccttt
tcatctgaactaggggttcagtttggtacttgtctggaagctccacatgtaatagatgtc
gaatcacagctgtgggctgctgtaatctctactggtccaggtaattatagattgaatgca
agttataagacagctgatgcatatgcttttcaggatgcactgggtacagctttggagaaa
atatgcaagatagtgcctggtggttctcttatattcttccctagttataagttaatggag
aaactatgtaaacgttggcatgcaactggccagtggtctagactaaatgctcaaaaatca
ctttttgttgagccaatgggaggaagccaggatgattttgaacatgttttaagggattat
tataatacaatttgtcaaagcaaaaggcctgctgttggaaaaaagagaaggggcaaaaga
cttgggcttagtaactgctatccagatgattgcacagaaaattgtaaggaaggagctgct
tttctagcagtttgcaggggaaaggtttcagaaggaattgacttttctgatgaaaatgct
agagtggttataattgtggggattccttttcctaatataaatgatattcaagttgttcaa
aagaaaaggtataatgacacatataaatcatctagacacctccttagtggaaatgagtgg
tattgtcaacaagccttccgagctctcaatcaagctgcaggccgttgtatcagacatagg
tttgactatggagctgtcatcttactagatgagcgctttcgtgaagaacggaatacaaca
tatatttcaaagtggctgaggaaatcaattaggcagtatgacaactttgagaactcactt
gaggaactaaaatcctttttcagaactgtcaagcaggaacggcttggcaaggatgctgtt
aatactacaaataatttagatgtaaatgtggaaagtactgctgctgtggatcgtggcaaa
gggttcgtgaataaaaataaaaaattgaacaaatctaacgaacatgggccaaaattagtt
tcagaaagcatcatttcgatggaaaaaagtaccaggttatctcaatgtccaactcctgtc
acaacaaattgtgtcacttttatcctatcagaatctgaagacaatgttgaagttcaagaa
ttgcttatagtggatgaaaaagatgttaccagttcaagagaatgtgttgatttagactgc
agttttcagaaagacctcgggtaccccagggccttatccatggaattttcgtctgatgat
ccagaaatatccattgtcagggagacccctagtatgaatgtcagtcctttagctagtccc
agatccttctccaaggatgaaaactctaattctacaataattgaggcccctggtaagatt
caggaccagttattattacattccagatccccgacatattcaaatgcagctcattcaaag
tcgacttcatcattggtggtcactcctgaaaaatatgtcagtgccaacatgaacagccat
ttaggtgaaacagagtcagttctgaatttgagtgtcaattctcatactcagaaaaggaga
aagccttcaggcttaaaatcagttaacctcatgcaagtagaacaatttgatgttcctgat
cccagagttacaggtcactcaagttctatggctagctcaatgataactaaagccgaaaat
tgcagagataaatttgtttttgagactagctgttctccaaatgaattgacgatgcccagt
gttactcaattgctcacgggaaataatgcttgggtatcatgtacagcttcaggtcatgtt
atgaacaagagactgcaaattttttgctcatgctgcaggaatccattgggtctacctcag
aaccatttatatataaggtgctccataacttccttatcaaaagtccatttgacaactctt
ctgaaaggaaggtctgaagctgctgctgaaaacatatcaactagtatacctgttgtgata
tctgacatatcttcagttgatcagcgactctgtgatataactcctgatagtgttccggga
cagggaatttggtgtagagaggatgggtgtgtgttcaatgctattttctgccctttttgc
agtaaacccaacaactgccttggtgtgcaggtcatggcaactgatacatcaaatgtccaa
ttacttgacaagatattgttttatcttgatcgtttggaaattaagaatcccgacgcatca
gaggataaggatttatcaccagcttgtagctccggctttactagtggtgcattcccgatt
tccattgagaaattctcatacatcccaccacagcagcactcaggaggttggagaacaaca
aaatcaaagatgcaattgccaaagagacaactgcttcctacctctggaggcagaggtgga
acctga
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