Diospyros lotus (date-plum): 127808051
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Entry
127808051 CDS
T10632
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127808051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dlt03041
]
127808051
Spliceosome [BR:
dlt03041
]
Complex A
U1 snRNP components
U1 related factors
127808051
Complex B
127808051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
DUF7138
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
127808051
NCBI-ProteinID:
XP_052202333
LinkDB
All DBs
Position
8:27825755..27917484
Genome browser
AA seq
1029 aa
AA seq
DB search
MANNPQSSGAQPLRPPAVGSLGLQSFGPPFPMQFRPVMAPQQGQPFIPASAPQQFLPVGQ
GNVGVSSNPNQQLQYSQPMQQLPMRPAQPAHSVPSSQAIPMTYIQPSMPLTSSSPQSHQA
APALNNHMPSLGGPGVPLSSSYTFAPSSFGQPQHAVPAAASSQFQPSQMHAPVAPIGGQP
WFSTGGQGGLVTAVQQLGQQSSDAAGVSAGNVPTTGQQSASDWQEHTSPDGRRYYYNKKT
RQSSWEKPLELMTPIERADASTVWKEFTTTDGRKYYYNKVTKQSKWQIPEELKLAREQAE
KAASQLTQSESSTNSSAMPNIAISSGEQSATTVTSVSSIPSSTISGLASSPVAVTPVVAV
NAAPLVVSGSSANPVSHAAGSSGVGTSSVSIAVTPSPSAAPSTASGSTVVPAALVSTNTT
SPVNSVGNLSSHDVLSSLDGSSIQDIEQDAKKGMAVAGKVNVTPLEDKSVEDEPVVYASK
QEAKDAFKALLESVNVESNWTWEQAMRVIINDKRYGALRTLGERKQAFNEYLGQRKKLEA
EERRMRMKKAREEFTKMLEECEELTSSTRWSKATIMFEEDERFKAIERPVEREDMFKSYL
VDLQKKEKEKAQEEYRRNRLEFRQFLETCGFIKVNTQWRKVQDRLEDDERCSRLEKFDRF
EIFQEYIRDLEKEEEEQRRMQKEQLKRAERKNRDAFRKMMEEHVAAGILTAKTHWRDYCM
KVKDSAPYQAVALNTSGSTPKDLFEDVAEELEKQYHDDKTRIKDAVKLGKVTITSTLDFE
DFKSAIFEGIGTSPIPEVNAKLVYEDLLERAREKEEKEAKKRQRLAKDFADLLVTIKEIT
GTSVWEESKQLFEESSEYRSIGEESFAKEIFEDHIIHLQEKAKEKERKREEEKAKKEKER
EEKEKRKEKEKAKERSKKDETESENIDEDDSYSHKEEKKREKDKERKHRRRHHSPADDVS
SDKDEKEESKKPRRRGSDRKKSRKHAYTPESDSESRHKRHKKDHRDGSRRNGGFEELEDG
ELGEDGEIR
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggccaataaccctcagtcttctggtgctcagcctctccgacctccagcagttggatca
ctgggcctgcaaagttttggtccaccctttcctatgcaatttcggcctgtcatggcacca
cagcaaggacagccatttattcctgcttcggctcctcaacaatttctgccagttggtcaa
ggtaatgttggagtctcatcaaatccaaatcagcagctgcaatattctcaaccgatgcag
cagttgcctatgcggcctgctcagcctgcacattctgtgccttcatcacaggcaattcct
atgacatacatccaaccaagcatgccgcttacatctagctcaccacagtctcatcaagct
gctcctgctttaaataatcatatgcctagtttaggtggccctggtgtccctctctcttcc
tcatatacatttgcaccatcttcttttggtcagccacagcatgctgtccctgcagctgca
tcatcccagttccagccatcacaaatgcatgcaccagttgcaccaatcggtggacagcct
tggttttcaactggaggtcaaggtggacttgttacagcagtgcagcagcttgggcaacaa
tcttcagatgctgctggagtttcggcaggaaatgttcctactactggtcaacaatctgca
tctgattggcaagaacacacttcgccagatggacgaagatattactacaacaagaaaact
agacaatctagttgggagaagcctttggaattgatgacaccaattgagcgagctgatgct
tctactgtatggaaggaattcacaactacagatggtagaaagtattactacaataaggtg
acaaaacaatctaaatggcaaatacctgaggagttgaagctggctagggaacaagctgag
aaagcagctagccaattgacacaatcagaaagtagtacaaattctagtgctatgccaaat
attgccatctcttctggggaacaatcagctactactgtcacttcggttagctccatccct
tcttcaaccatatctgggttagcttcaagcccagttgcagttacgccagttgttgctgtt
aatgctgctcctctggtggtttctggatcctcagccaatcctgtttcacatgctgctgga
tcaagtggtgttggcacatcctctgttagcatagctgtcactccctcaccttccgctgct
ccttctactgcttcaggaagtactgtggttcctgctgctttagttagcactaatactact
tcgccagtgaatagcgttggaaatttgtcatctcacgatgttttgagttctttagatgga
tcttccattcaggatattgagcaggatgccaagaaaggaatggcagttgcagggaaagtc
aatgtgacaccattggaggataaatctgttgaagatgaacctgtggtgtacgccagcaag
caggaagcgaaagatgcttttaaagcactgttggaatctgtaaatgttgaatccaactgg
acctgggagcaggcaatgcgagtaatcatcaatgacaagagatatggggctttaagaact
cttggtgagcgtaaacaggcattcaatgagtacttgggccaaaggaagaagctggaggct
gaggaaaggcgaatgagaatgaaaaaagctcgcgaggaattcacaaaaatgttggaagag
tgtgaggaactcacttcatccacaagatggagtaaagctaccattatgtttgaggaagat
gaacggttcaaggcgatagagcgacctgtagagcgtgaagatatgttcaaaagctactta
gtggatcttcagaaaaaggagaaggaaaaagctcaggaggagtatcggcggaatagatta
gagttcagacaatttctagaaacctgtggctttatcaaagtgaacacccaatggaggaaa
gttcaagatcggttagaggatgatgaaagatgctcgcgtctggaaaaatttgaccgcttt
gaaattttccaggagtatattcgtgatctggagaaggaggaagaggagcagaggaggatg
cagaaggaacaattgaagcgggctgaacgtaagaaccgtgatgcgtttcggaagatgatg
gaagagcatgttgctgccggaatactcactgctaaaactcactggcgtgattactgcatg
aaggtaaaggattctgcaccctatcaggctgttgcgctgaatacatctggttctacacca
aaagatttatttgaggatgttgctgaagagttagagaagcagtatcatgatgacaaaact
cgaataaaagatgctgtgaagttggggaaggttacaatcacatcaactttggattttgaa
gatttcaagtctgctatttttgagggaataggtacctctccaatacctgaggtcaatgcg
aagctagtatatgaggatctacttgagagagccagagagaaggaggaaaaagaagctaaa
aagcgtcaacgtctggcaaaagactttgctgatctcttagtcaccatcaaggaaatcacc
ggaacttctgtttgggaggaaagcaaacagctttttgaggagagctcagaatacagatca
attggagaagagagctttgccaaggagatctttgaggaccacatcatacatttgcaggaa
aaggcaaaagaaaaggaacgtaagagagaagaggaaaaggccaagaaggagaaagaaaga
gaggaaaaagaaaagaggaaggaaaaggagaaggcgaaggaacggtctaagaaggatgaa
acagagagtgaaaatatagatgaggatgacagctacagccataaggaggagaaaaaaaga
gagaaagacaaagagcgaaagcatcggaggcggcatcatagtccagctgatgatgtcagt
tctgacaaggatgaaaaagaagagtcaaagaagccacgccgacgtggaagtgaccgtaaa
aaatcaagaaaacatgcatatacacctgaatcagatagtgaaagcaggcataaaagacac
aagaaagatcaccgggatggttctcgcagaaatggtgggttcgaggagcttgaagatgga
gagcttggagaggatggtgagattcggtaa
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integrated database retrieval system
